Nicotiana attenuata (coyote tobacco): 109230166
Help
Entry
109230166 CDS
T05870
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109230166
Enzymes [BR:
nau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
109230166
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109230166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
109230166
NCBI-ProteinID:
XP_019251234
LinkDB
All DBs
Position
7:72886390..72891758
Genome browser
AA seq
253 aa
AA seq
DB search
MAGHYILKDGFAPVMLISNKLLAYSSKVRVLSFMPVMPLAPQENERVVDMAAAPGSKTTY
FAALMKNSVNQNMLGAFVVFYYALMYIILSHVVYISLCCQSLPKVFGQNTADRILLDAPC
SGTGVISKDESVKTSKTAADIQNCSQLQKELILAAIDMVDANSKSGGYIVYSTCSIMVDE
NEAVIDYALKKRDVKLVSCGLDFGRPGFIRFMQHRFHTSLDKTRRFYPHVHNMDGFFVAK
VYAVSFGDNLCCQ
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcattacattttaaaagatggctttgcacctgtaatgcttatttcaaacaaa
ttacttgcttacagctccaaggtgcgagttcttagttttatgcccgtaatgccccttgcc
cctcaggagaatgaacgtgttgttgatatggctgctgctcctggaagcaaaacaacttat
tttgctgcactgatgaaaaatagtgtgaaccaaaatatgctgggtgctttcgttgtattt
tactatgcgctcatgtacatcattcttagtcatgtggtttacattagcctgtgctgtcaa
tctctgcctaaagtctttggtcagaacactgctgataggattttgctggatgctccctgc
agtggcactggggtaatctccaaggacgagtctgttaaaacttccaaaaccgctgctgat
atacaaaactgctcacaactgcagaaggaactgatacttgcagcgattgacatggttgat
gccaactcaaaatcaggtggatacatagtgtattctacctgctccattatggttgatgag
aatgaagcagttatagactatgcactcaagaagagagatgttaaacttgtgtcatgtggt
cttgattttgggaggcctggatttattcgctttatgcagcaccgcttccacacatctttg
gacaagacaaggcgattctatcctcatgtgcacaacatggatggattctttgtagcaaag
gtgtatgccgtatcatttggtgataatttgtgctgtcaatag
DBGET
integrated database retrieval system
