Nicotiana attenuata (coyote tobacco): 109230359
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Entry
109230359 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109230359
04121 Ubiquitin system [BR:
nau04121
]
109230359
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109230359
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109230359
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109230359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
zf-RING_5
zf-HC5HC2H
DUF7129
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
109230359
NCBI-ProteinID:
XP_019251411
UniProt:
A0A1J6JNT1
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All DBs
Position
1:complement(91875887..91878221)
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AA seq
344 aa
AA seq
DB search
MDGRGASRYWCHQCSRRVDPAMEVELKCPICQQGFVEEMGSDTALENDLGGSDSDRALSL
WAPILLGMMSNPRRRSRFRHHLEFDSDDDDDHTREGGDTELDPELASIMNRRRRNSATIL
QLLQSIRAGMENAEGENSGETGRESRDGEERVILVNPFNQTIIVQGSYDSDNSDRPIGSL
GDYFIGPGLDMLLQHLAENDPNRYGTPPAQKEAVEALPAVKIDETLQCSVCLEDFEIGTE
AKEMPCKHKFHSECILPWLELHSTCPVCRHQLPSDESKVENVTGNTNAAQSSDTRNENGR
RFPVSLPWPLSGLFTSGTQSSNGNSSSTTTSSGNANSNAHMHDD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagaggagcatcaagatattggtgtcatcagtgttcaaggagggtggacccc
gcgatggaggtggaattaaaatgtcctatttgtcaacaaggttttgttgaggaaatggga
tcagacactgctcttgaaaatgatttgggagggtccgactctgatcgtgccctctcgcta
tgggcgccaatcttgttaggcatgatgagcaatcctcgtcgtcgctctaggtttaggcat
catctcgaatttgatagtgatgatgatgatgatcatactcgtgaaggtggggacacggaa
cttgatcctgagctggcatctataatgaataggcggaggaggaactccgccactattctc
cagctcttgcaaagtattcgagctggtatggagaatgctgagggtgaaaatagtggggag
acaggtagagagagtagggatggcgaggagcgtgtgatacttgtaaatccattcaatcaa
accatcattgtgcagggttcttatgattcggataatagtgaccgccccattggctcattg
ggtgattatttcattggtcctggtttagacatgttgctgcaacatttggcagagaatgat
ccgaataggtatggtactccaccagctcaaaaagaggctgtagaggcattgcctgcggtg
aaaattgacgagacgctgcagtgttccgtgtgtttggaagactttgagattgggactgaa
gccaaagagatgccttgtaagcacaagtttcacagcgagtgtatcttaccgtggctggag
cttcatagcacctgtccagtctgtaggcatcagttgccctctgatgaatcaaaagttgag
aatgtcactggtaacacaaatgctgctcagagtagtgatacaaggaatgaaaacggtcga
cgttttccagtgtcgcttccatggcctttgagtggtttgtttacatcaggtacccaatct
agtaatggaaattcatcatcaacgactacttcatcaggaaatgcaaactcaaatgctcat
atgcatgatgattag
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