Nicotiana attenuata (coyote tobacco): 109230808
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Entry
109230808 CDS
T05870
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109230808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109230808
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109230808
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
109230808
NCBI-ProteinID:
XP_019251790
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All DBs
Position
8:6579439..6596262
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AA seq
326 aa
AA seq
DB search
MANLPQSFSIGVGGFGSGGAAASSSSAVGAPADKDRKMQSAEQLVLDLSNPDLRENALLE
LSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVA
SHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLST
EIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICATAERFFAVARVLGNMVGALA
EQPSSRLLKHIIRCYLRLSDNVRACDALRNCLPDMLRDTTFSSCLREDPTTRRWLQQLIH
NVSVPRVSLQAGGFDHMLVNSLSSHN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttacctcagtctttctcaatcggcgttggcggtttcggtagcggcggagcg
gcagcatcctcttcctctgcagtcggagctccggcggataaggatcgcaaaatgcaatcc
gctgaacagcttgtgcttgatctcagcaatcctgatcttcgagaaaacgctctcctagaa
ctttccaagaagagggaactgttccaggatttggcccccttgttgtggaactcatttggt
actatcgctgcacttctacaggagatagtttccatctaccctgttttgtcaccaccaaac
ctgactcctgctcaatccaatagagtttgtaatgcactagcacttcttcagtgtgtagct
tctcaccctgacaccagaatgttgttcctcaatgcgcatattccgttgtatctgtaccct
tttcttaatacaacaagcaagtcaagaccttttgaatatctgaggcttactagcttaggt
gtcattggtgccctggtgaaggtagatgacactgaagttatcagctttctcctatcgaca
gagataattcccctgtgcttgcgtacgatggagatggggagtgaactgtcaaaaacagtt
gcaactttcattgtgcaaaaaatccttctagatgatgtgggtctggattacatctgtgcc
acagctgagaggttttttgcagtagcccgagttttagggaatatggttggtgcgctcgct
gaacagccttcatcaagactgctgaaacacataattaggtgctatcttcgtttgtcagat
aatgttagggcatgtgatgcactgagaaattgtcttccggatatgcttagagataccacc
ttcagcagttgtcttcgtgaggatccaacaacgaggaggtggctacaacaattgatccat
aatgttagtgtgcctcgggtttctttgcaggcgggaggttttgatcatatgctggtgaat
tcactgagttcacacaactag
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