KEGG   Nicotiana attenuata (coyote tobacco): 109231024
Entry
109231024         CDS       T05870                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109231024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109231024
   03041 Spliceosome [BR:nau03041]
    109231024
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109231024
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109231024
Spliceosome [BR:nau03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109231024
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35
Other DBs
NCBI-GeneID: 109231024
NCBI-ProteinID: XP_019252096
UniProt: A0A1J6JG37
LinkDB
Position
1:complement(99861838..99866276)
AA seq 486 aa
MAKKRKTRASEAAVQPVEEEQQNIKQESADLEPEQEQEEYQNDAVEEEEEEAVQEDGEEP
DPEEDENEDGDDNEEEEEENPGSGNNAVNEVNGGGSEVKQEGGGDEEEDLEDEPLEKLLE
PFTKDQLTALIKEALVTYPNLKDNIQKLADKDPAHRKIFVHGLGWDTTAETLTSVFGKYG
EIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALREPQKKIGTRMTSCQLASAGPVPAPP
PTAAAAPPVSEYTQRKIFVSNVAADLDPQKLLEFFSKFGEVEEGPLGLDKQTGKPKGFCL
FVYKSVESARKALEEPHKSFEGHTLHCQKAVDGPKHNKNYYQQHQQPQQHYPQHQQHQQY
YQHPAKKGKYSGGSGSGAAASAGHLMAPSGPAPVGFNPAVAPALGQALTALLATQGAGLG
IGNLLGGFSGPVNPQGVPPVMNNAGGYGAQGAAGGYGAQPMQYQNPQMQGGARPHGGAPY
PGYGGH
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggcgaagaagagaaaaaccagagcttccgaagccgccgtacaaccagtagaagaagaa
cagcaaaatattaaacaagaatcagcagatctcgaacccgaacaagaacaagaagagtac
caaaacgacgccgtagaagaagaagaagaagaagcagttcaagaggacggagaagaacca
gatcctgaagaagatgaaaacgaagacggtgatgataatgaagaagaagaggaagaaaat
ccaggatctggaaacaatgccgtaaatgaagttaacggaggcggtagtgaggtgaagcag
gaaggaggaggcgatgaagaagaggatttagaagatgagccacttgagaagcttctagaa
cctttcacgaaggatcaacttacagcgcttataaaagaagctttagttacttaccctaat
ttgaaggataatattcagaaattggccgataaggatccggcgcaccgcaaaatcttcgtg
cacggcttgggttgggacactacagctgaaaccctaacgagcgtgttcgggaagtacggt
gagattgaggattgtaaggctgttacggataaggttagtgggaagtcaaaaggatacggg
tttattttgtttaagcataggagtggcgctaggaaagcattgagggaaccacagaagaaa
attggtactaggatgacttcttgccagctggcttcggctgggccggtccctgccccgccc
cctacagcagcggctgccccaccagtttctgagtatactcagaggaagatttttgttagc
aatgtggcagctgatcttgatcctcaaaagctgttggagtttttctctaagtttggtgaa
gtcgaggagggtccacttggattggataagcaaactgggaaacccaaggggttttgtttg
tttgtgtataagagtgtcgagagtgcaagaaaggcattggaggagccgcataagagcttt
gaagggcatacacttcattgtcagaaggccgttgatgggccgaagcacaataagaactac
tatcagcagcaccagcagccgcaacagcattaccctcagcaccagcagcaccagcagtat
tatcagcatcctgcaaagaaggggaaatattcaggtggtagtggcagtggagcagcagca
tcagctgggcatttgatggcgccatcagggcctgcacccgtgggattcaatcctgctgtg
gctccggctcttgggcaggcattgacagccctgttagctacacaaggagctggtttgggg
attgggaatttgcttggaggttttagtgggccagtgaatcctcagggtgtgcccccagtg
atgaacaatgccggaggatatggtgcccagggtgctgctggtggctatggagctcagccg
atgcagtaccaaaacccgcagatgcagggcggtgcaagaccacatggtggtgcaccttac
ccaggctatggaggtcactag

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