Nicotiana attenuata (coyote tobacco): 109231054
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Entry
109231054 CDS
T05870
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04142
Lysosome
nau04144
Endocytosis
nau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109231054
04142 Lysosome
109231054
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109231054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109231054
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109231054
Membrane trafficking [BR:
nau04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109231054
Exosome [BR:
nau04147
]
Exosomal proteins
Proteins found in most exosomes
109231054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
109231054
NCBI-ProteinID:
XP_019252135
UniProt:
A0A1J6I4I0
LinkDB
All DBs
Position
8:22637364..22650087
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAANAPITMKEALTLSSIGVNPQFITFTNVTMESDKYICVRETAPQSSVVIVDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKQKMKSHQMPEQVVFWKWI
TPKILGIVTQTSVYHWPIEGDTEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQSLEAHAASFASFRVPGSDRDSILISFATRSLNAGQVVS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIFVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSVGGFYAVNRRGQVLLATVNETTIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
PGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEDLGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRSRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGIDACIKLFEQFK
SYDGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGNCDDELINVTNKNSLFKLQARY
VVERMDAELWEKVLNPENEFRRQLIDQVVSTALSESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVSVLLDNIRNINRAVEFAFRVEEDAVWSQVAKAQLREGLISDAIE
SFIRADDTTQFLDVIRAAEDADVYHDLVKYLLMVRQKSKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLASTLVKLNQFQGAVDAARK
ASSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIVVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESVDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKRAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQNEAKAKENEEKDVMKQQNMYAQLLPLALPAPPGMGGAGMGGGFAP
PPPPPMGGMGMPPMPPFGMPPMGPY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctaatgctccgatcactatgaaagaggcccttacattgtcaagtataggg
gtgaacccgcagttcattacattcacaaatgttaccatggaatcagacaagtatatatgt
gttcgagagacggcaccacaaagtagtgtggtgattgttgatatgaatatgccaatgcag
cctttgcgccgccctattactgctgactctgctcttatgaatcccaattccagaattttg
gctctaaaagctcaagtaccaggaactactcaagatcacttacaaatttttaatattgag
gcaaagcagaaaatgaagtcacatcagatgcccgagcaggttgttttctggaagtggatt
actccgaagattttaggaattgtcacacaaacctcagtctatcattggccaattgaaggt
gatactgagcctgtaaagatgtttgatagaacagccaacctagccaataaccaaataatc
aattatcgttgtgatccttcagagaaatggttggttttgattggtattgccccaggttca
ccggagaggccccaactggtcaaaggaaatatgcaactattttcagttgatcagcaacgg
agtcaatccctcgaggctcacgctgcatcatttgcatcattcagagtacctggaagtgat
agggattccatactcatttcttttgccacgagaagcttgaatgctggacaggttgtatca
aagttgcatgtcattgagctgggagcccagccagggaaaccctcatttacaaaaaaacag
gcggatcttttcttccctccagattttgctgatgatttcccagttgccatgcagatatct
cataagtatagtttaatttttgtcatcacaaagcttgggcttctttttgtctatgacctg
gaaacagctactgcagtttacagaaataggattagcccagaccctattttcctgacagct
gaagcttcgtcagttggtgggttttatgccgtcaacaggcgaggccaagtgttgctagcc
acagtaaatgaaacaactattataccttttatcagtggccaattgaacaatctggagctt
gctgtcaatcttgctaaaagaggaaaccttccaggtgctgagaatttggtcgtccagcgc
tttcaagagttgtttgctcaaaccaagtacaaagaggctgctgagcttgctgctgaatca
cctcagggcatactccggacgcctgatactgttgccaaatttcagagtgttcctgttcaa
ccagggcaaacacctcctcttttgcagtactttgggacacttttgacaaaagggaagctc
aatgcttttgagtcattagaactgtcacgccttgttgtcaaccaaaataagaagaacctt
ttggagaactggttagctgaggataagttggagtgcagtgaggatcttggtgaccttgtg
aagactgttgataatgaccttgccttgaagatatacatcaaagcaagagcaactccaaaa
gttgtcgctgcttttgcggagcgcagggagtttgacaagattctgatatattccaaacag
gttggatatacacctgactatctgttcctcctgcaaacaattcttcgatctgatcctcag
ggagctgttaactttgcactcatgatgtcccaaatggagggaggatgtccagttgattat
aatacaatcactgacctttttctccagaggaacttgatccgcgaggcaacagcatttttg
ttggatgttctgaaacctaaccttccagaacatggttttttgcagactaaggtattggaa
atcaatcttgtgactttccccaatgtagcagatgctatattagcaaatggaatgttcagt
cactatgatcgatctcgaattgctcaactttgtgaaaaagctggtctttacgtccgggct
ctgcagcactattctgagctccctgatatcaagcgtgtcattgtgaacacacatgccatt
gagcctcaggctctggttgagttctttgggactctttcgcgtgaatgggctcttgagtgc
atgaaagacctcctagtgatcaatatcaaaggcaaccttcaaataattgttcaggttgca
aaagagtattgtgagcagttgggtattgatgcctgcataaagctttttgagcagttcaag
tcttatgatgggttgtacttcttcttgggatcatatttgagttccagtgaggatcctgat
attcacttcaaatatattgaggcagctgccaggactggacaaatcaaggaggttgagcgc
gtcacaagagaatcaaacttctatgaccctgaaaagacgaagaacttcttgatggaagcc
aaacttcccgatgctcggcctcttattaatgtttgtgaccgctttggttttgttcctgat
ctcacacactacctctataccaacaatatgctacggtacattgaaggttatgtccaaaag
gtcaacccaggaaatgctcctttagttgtgggacagttattggatgatgagtgtcctgag
gattttattaaaggcttgatcctttccgttcgttctctgcttcctgttgagccccttgtg
gatgaatgtgaaaagaggaaccgcctccgactgcttactcagtttttggagcatcttgtg
agtgaaggaagccaagatgtgcatgtacacaatgctctgggtaagatcatcatagatagc
aacaataacccggagcacttcctgacgaccaatccatattatgattcacgtgttgtgggt
aaatattgtgagaagcgcgatcctacccttgctgttgttgcatatcggagagggaactgt
gatgatgaacttatcaatgtaacaaacaagaactctttgttcaaactgcaagccaggtat
gtcgttgagagaatggatgctgaactttgggagaaggttcttaaccctgaaaacgagttc
agaaggcagcttattgatcaagttgtctccactgctctgtctgagagcaaaagcccagaa
caagtttctgctgctgttaaagctttcatgactgctgatcttccgcatgaactgattgag
cttcttgaaaagattgtgctccaaaactctgcattcagtgggaactttaatctgcaaaac
ttgcttatcttgacagccattaaagctgacccttcaagggttatggactatatcaacagg
cttgataattttgatggacctgcagtaggggaggtagctgtagaagcccaactttatgaa
gaagcatttgcaatcttcaagaagttcaatttgaatgtccaggctgtcagtgttctgcta
gataatatccgcaatataaatcgggctgtggagtttgccttccgagttgaagaagatgct
gtttggagccaagtggctaaagctcaactgagagaaggattaatcagtgatgctattgag
tcgtttattcgtgcagatgataccacccaatttttggatgttattcgtgctgcagaggat
gcagatgtttaccatgatttggtgaagtatctgctgatggtaagacagaagtcaaaagag
cccaaggttgacagtgaactaatctatgcatatgctaaaatagatcgattgagcgacatt
gaagagttcattctcatgccaaatgttgctaatctaccgaatgttggtgaccggttgtat
gatgaagccttatatgaggctgcaaagatcatttttgcttttatttctaactgggccaag
ttggctagtacacttgtgaagctaaatcagttccaaggtgctgttgatgcagcacgtaaa
gcaagtagtgcaaaaacgtggaaagaagtctgctttgcttgtgttgacgctgaagagttc
cgcttagctcagatttgtgggcttaacattatcgtacaggtggatgatctggaggaagtg
agtgaatattaccaaaacagaggatgtttcaatgaattgatctcccttatggagagtggg
ctgggtttggagcgtgcccatatgggtattttcacagaacttggcgtcctttatgccaga
taccgttacgagaagctcatggaacacattaagttattttccacccgtctcaacattccc
aagcttatccgtgcctgtgatgagcagcaacactggaaagaacttacatatttgtatatc
caatatgatgaatttgacaatgctgccactactgtcatgaatcattctccggatgcttgg
gatcatatgcagttcaaagatattgttgtcaaagttgctaatgtggagctttattacaag
gccgtccatttctatttgcaagagcaccctgatcttatcaatgatcttttaaatgttctt
gcacttagagtggaccacacccgtgtagtcgacataatgagaaaggctggtcatcttcgc
ctagtgaagccttatatgattgctgttcaaagtaacaatgtttctgctgtaaacgaggcc
cttaatgagatttatgttgaagaagaagactatgatagattacgtgaatcagttgatttg
catgataactttgaccagattggccttgcgcagaagattgagaaacatgagcttcttgag
atgaggcgggttgctgcttatatctataaaagggctggtcgatggaagcaatctattgct
ttgtcgaagaaagataatctttacaaagatgcaatggagactgcctcacaatccggggat
cgtgaacttgctgaagagttgcttgtttatttcattgaacaggggaagaaagaatgcttt
gcatcgtgcctgtttgtttgttatgatttgattcgcccggatgttgcccttgagcttgcg
tggatgaataatatgatcgactttgcattcccgtacctgttacagtttattcgcgaatac
actggcaaggttgatgagctaataaaagataaaattgaggctcaaaatgaagcaaaagcc
aaagagaatgaagagaaggacgttatgaagcagcagaatatgtatgctcagctgctgccc
ctggctttgcctgctccaccgggtatgggaggtgcaggtatgggaggaggctttgctcca
ccaccaccacctccaatgggtggaatgggaatgcctcccatgcctccatttggtatgcca
cccatgggtccctactaa
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integrated database retrieval system