KEGG   Nicotiana attenuata (coyote tobacco): 109231054
Entry
109231054         CDS       T05870                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau04142  Lysosome
nau04144  Endocytosis
nau05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:nau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109231054
   04142 Lysosome
    109231054
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    109231054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nau04131]
    109231054
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nau04147]
    109231054
Membrane trafficking [BR:nau04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    109231054
Exosome [BR:nau04147]
 Exosomal proteins
  Proteins found in most exosomes
   109231054
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 109231054
NCBI-ProteinID: XP_019252135
UniProt: A0A1J6I4I0
LinkDB
Position
8:22637364..22650087
AA seq 1705 aa
MAAANAPITMKEALTLSSIGVNPQFITFTNVTMESDKYICVRETAPQSSVVIVDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKQKMKSHQMPEQVVFWKWI
TPKILGIVTQTSVYHWPIEGDTEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQSLEAHAASFASFRVPGSDRDSILISFATRSLNAGQVVS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIFVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSVGGFYAVNRRGQVLLATVNETTIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
PGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEDLGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRSRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGIDACIKLFEQFK
SYDGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGNCDDELINVTNKNSLFKLQARY
VVERMDAELWEKVLNPENEFRRQLIDQVVSTALSESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVSVLLDNIRNINRAVEFAFRVEEDAVWSQVAKAQLREGLISDAIE
SFIRADDTTQFLDVIRAAEDADVYHDLVKYLLMVRQKSKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLASTLVKLNQFQGAVDAARK
ASSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIVVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESVDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKRAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQNEAKAKENEEKDVMKQQNMYAQLLPLALPAPPGMGGAGMGGGFAP
PPPPPMGGMGMPPMPPFGMPPMGPY
NT seq 5118 nt   +upstreamnt  +downstreamnt
atggcggctgctaatgctccgatcactatgaaagaggcccttacattgtcaagtataggg
gtgaacccgcagttcattacattcacaaatgttaccatggaatcagacaagtatatatgt
gttcgagagacggcaccacaaagtagtgtggtgattgttgatatgaatatgccaatgcag
cctttgcgccgccctattactgctgactctgctcttatgaatcccaattccagaattttg
gctctaaaagctcaagtaccaggaactactcaagatcacttacaaatttttaatattgag
gcaaagcagaaaatgaagtcacatcagatgcccgagcaggttgttttctggaagtggatt
actccgaagattttaggaattgtcacacaaacctcagtctatcattggccaattgaaggt
gatactgagcctgtaaagatgtttgatagaacagccaacctagccaataaccaaataatc
aattatcgttgtgatccttcagagaaatggttggttttgattggtattgccccaggttca
ccggagaggccccaactggtcaaaggaaatatgcaactattttcagttgatcagcaacgg
agtcaatccctcgaggctcacgctgcatcatttgcatcattcagagtacctggaagtgat
agggattccatactcatttcttttgccacgagaagcttgaatgctggacaggttgtatca
aagttgcatgtcattgagctgggagcccagccagggaaaccctcatttacaaaaaaacag
gcggatcttttcttccctccagattttgctgatgatttcccagttgccatgcagatatct
cataagtatagtttaatttttgtcatcacaaagcttgggcttctttttgtctatgacctg
gaaacagctactgcagtttacagaaataggattagcccagaccctattttcctgacagct
gaagcttcgtcagttggtgggttttatgccgtcaacaggcgaggccaagtgttgctagcc
acagtaaatgaaacaactattataccttttatcagtggccaattgaacaatctggagctt
gctgtcaatcttgctaaaagaggaaaccttccaggtgctgagaatttggtcgtccagcgc
tttcaagagttgtttgctcaaaccaagtacaaagaggctgctgagcttgctgctgaatca
cctcagggcatactccggacgcctgatactgttgccaaatttcagagtgttcctgttcaa
ccagggcaaacacctcctcttttgcagtactttgggacacttttgacaaaagggaagctc
aatgcttttgagtcattagaactgtcacgccttgttgtcaaccaaaataagaagaacctt
ttggagaactggttagctgaggataagttggagtgcagtgaggatcttggtgaccttgtg
aagactgttgataatgaccttgccttgaagatatacatcaaagcaagagcaactccaaaa
gttgtcgctgcttttgcggagcgcagggagtttgacaagattctgatatattccaaacag
gttggatatacacctgactatctgttcctcctgcaaacaattcttcgatctgatcctcag
ggagctgttaactttgcactcatgatgtcccaaatggagggaggatgtccagttgattat
aatacaatcactgacctttttctccagaggaacttgatccgcgaggcaacagcatttttg
ttggatgttctgaaacctaaccttccagaacatggttttttgcagactaaggtattggaa
atcaatcttgtgactttccccaatgtagcagatgctatattagcaaatggaatgttcagt
cactatgatcgatctcgaattgctcaactttgtgaaaaagctggtctttacgtccgggct
ctgcagcactattctgagctccctgatatcaagcgtgtcattgtgaacacacatgccatt
gagcctcaggctctggttgagttctttgggactctttcgcgtgaatgggctcttgagtgc
atgaaagacctcctagtgatcaatatcaaaggcaaccttcaaataattgttcaggttgca
aaagagtattgtgagcagttgggtattgatgcctgcataaagctttttgagcagttcaag
tcttatgatgggttgtacttcttcttgggatcatatttgagttccagtgaggatcctgat
attcacttcaaatatattgaggcagctgccaggactggacaaatcaaggaggttgagcgc
gtcacaagagaatcaaacttctatgaccctgaaaagacgaagaacttcttgatggaagcc
aaacttcccgatgctcggcctcttattaatgtttgtgaccgctttggttttgttcctgat
ctcacacactacctctataccaacaatatgctacggtacattgaaggttatgtccaaaag
gtcaacccaggaaatgctcctttagttgtgggacagttattggatgatgagtgtcctgag
gattttattaaaggcttgatcctttccgttcgttctctgcttcctgttgagccccttgtg
gatgaatgtgaaaagaggaaccgcctccgactgcttactcagtttttggagcatcttgtg
agtgaaggaagccaagatgtgcatgtacacaatgctctgggtaagatcatcatagatagc
aacaataacccggagcacttcctgacgaccaatccatattatgattcacgtgttgtgggt
aaatattgtgagaagcgcgatcctacccttgctgttgttgcatatcggagagggaactgt
gatgatgaacttatcaatgtaacaaacaagaactctttgttcaaactgcaagccaggtat
gtcgttgagagaatggatgctgaactttgggagaaggttcttaaccctgaaaacgagttc
agaaggcagcttattgatcaagttgtctccactgctctgtctgagagcaaaagcccagaa
caagtttctgctgctgttaaagctttcatgactgctgatcttccgcatgaactgattgag
cttcttgaaaagattgtgctccaaaactctgcattcagtgggaactttaatctgcaaaac
ttgcttatcttgacagccattaaagctgacccttcaagggttatggactatatcaacagg
cttgataattttgatggacctgcagtaggggaggtagctgtagaagcccaactttatgaa
gaagcatttgcaatcttcaagaagttcaatttgaatgtccaggctgtcagtgttctgcta
gataatatccgcaatataaatcgggctgtggagtttgccttccgagttgaagaagatgct
gtttggagccaagtggctaaagctcaactgagagaaggattaatcagtgatgctattgag
tcgtttattcgtgcagatgataccacccaatttttggatgttattcgtgctgcagaggat
gcagatgtttaccatgatttggtgaagtatctgctgatggtaagacagaagtcaaaagag
cccaaggttgacagtgaactaatctatgcatatgctaaaatagatcgattgagcgacatt
gaagagttcattctcatgccaaatgttgctaatctaccgaatgttggtgaccggttgtat
gatgaagccttatatgaggctgcaaagatcatttttgcttttatttctaactgggccaag
ttggctagtacacttgtgaagctaaatcagttccaaggtgctgttgatgcagcacgtaaa
gcaagtagtgcaaaaacgtggaaagaagtctgctttgcttgtgttgacgctgaagagttc
cgcttagctcagatttgtgggcttaacattatcgtacaggtggatgatctggaggaagtg
agtgaatattaccaaaacagaggatgtttcaatgaattgatctcccttatggagagtggg
ctgggtttggagcgtgcccatatgggtattttcacagaacttggcgtcctttatgccaga
taccgttacgagaagctcatggaacacattaagttattttccacccgtctcaacattccc
aagcttatccgtgcctgtgatgagcagcaacactggaaagaacttacatatttgtatatc
caatatgatgaatttgacaatgctgccactactgtcatgaatcattctccggatgcttgg
gatcatatgcagttcaaagatattgttgtcaaagttgctaatgtggagctttattacaag
gccgtccatttctatttgcaagagcaccctgatcttatcaatgatcttttaaatgttctt
gcacttagagtggaccacacccgtgtagtcgacataatgagaaaggctggtcatcttcgc
ctagtgaagccttatatgattgctgttcaaagtaacaatgtttctgctgtaaacgaggcc
cttaatgagatttatgttgaagaagaagactatgatagattacgtgaatcagttgatttg
catgataactttgaccagattggccttgcgcagaagattgagaaacatgagcttcttgag
atgaggcgggttgctgcttatatctataaaagggctggtcgatggaagcaatctattgct
ttgtcgaagaaagataatctttacaaagatgcaatggagactgcctcacaatccggggat
cgtgaacttgctgaagagttgcttgtttatttcattgaacaggggaagaaagaatgcttt
gcatcgtgcctgtttgtttgttatgatttgattcgcccggatgttgcccttgagcttgcg
tggatgaataatatgatcgactttgcattcccgtacctgttacagtttattcgcgaatac
actggcaaggttgatgagctaataaaagataaaattgaggctcaaaatgaagcaaaagcc
aaagagaatgaagagaaggacgttatgaagcagcagaatatgtatgctcagctgctgccc
ctggctttgcctgctccaccgggtatgggaggtgcaggtatgggaggaggctttgctcca
ccaccaccacctccaatgggtggaatgggaatgcctcccatgcctccatttggtatgcca
cccatgggtccctactaa

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