Nicotiana attenuata (coyote tobacco): 109231131
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Entry
109231131 CDS
T05870
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109231131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109231131
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109231131
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
109231131
NCBI-ProteinID:
XP_019252238
UniProt:
A0A1J6I361
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Position
8:28272849..28277338
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDKDRNSVSLVCKSWYEIERWCRRRIFVGNCYAVSPSLMIRR
FPEVRSVELKGKPHFADFNLVPEGWGAYVHPWIVAMSRSYPWLEEIRLKRMVITDDSLEL
ISKSFKNFKVLVLSSCDGFTTDGLASIAANCRNIRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNLACLASEISFLALERLVARSPNLRTLRINRAVPLEKLPNLLRRASQLIEFGTGA
YSADVRSDVFSNLTEAFSGCKQLKGLSGFWDVVPAYLPAIYPVCSRLTSLNLSYATSQNP
DLGKLISQCHNLQRLWVLDYIEDIGLEELAANCKDLQELRVFPSDPFAPEPNATLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRSPDYLTLGPLDAGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEVIDERGPP
DTRPESCPVEKLYIYRTVAGPRFDTPGFVWTMDEDTAVRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcattcccggaagaagttttagaacacgtgttctccttcctcagctccgac
aaggaccgcaactctgtatccttagtctgcaaatcatggtacgagatcgaacgctggtgt
cggaggagaatcttcgtcggaaactgctacgccgtgagccctagcctcatgatccgacgg
tttccagaagtcagatctgtagagttaaaaggaaagcctcattttgctgacttcaatctg
gtccctgaaggttggggtgcgtacgtgcacccttggattgtggctatgtctaggtcttac
ccttggcttgaggaaattaggcttaagcgtatggtaattacggatgattccttggagttg
atttctaagtcgtttaagaacttcaaggtgctggttttgtcttcttgtgacggttttact
actgatggtcttgcttctattgccgctaattgcaggaatattagagaactggacttggga
gagagtgaagtggaggaccttagtggacattggcttagccattttcctgatagctgcaca
tcacttgtttcacttaaccttgcctgtttggcttctgagatcagtttcttagctttggag
cgtttggttgcccgctctcctaatttgaggactcttcggataaatcgtgctgtacccctt
gagaagcttccgaatctgcttcgccgcgcttcccagttgattgaatttggtacaggcgcc
tactctgctgatgtacggtctgatgtcttctcaaacctgacagaagctttttcaggctgc
aagcaacttaaaggcttgtctgggttttgggatgttgttccggcttaccttccagctata
tatcctgtttgctccagactcacctctttaaatttgagctatgctaccagtcaaaacccc
gaccttggcaagctcataagtcagtgtcacaacttgcagcggttgtgggtgctagattac
attgaagatattggtcttgaggaacttgctgccaattgtaaggaccttcaagagctgagg
gtgtttccttctgatccttttgctcctgaaccaaatgcaaccttgacggagcaaggcctt
gtagctgtctcagatggctgcccaaagctccagtctgttttatacttctgccgtcaaatg
acaaatgcagctttagttactattgctaggaatcgtcctaacatgattcgttttcgcttg
tgtattattgagcctcgaagtcccgattacttaactcttgggccgcttgatgctggtttt
ggggccattgtggagaactgtaaagaattgcggcgactttcactttctggcctccttact
gatcgtgtctttgagtacatagggacccatgctaaaaagttagagatgctttccatagct
tttgccggggacagcgatttgggactccaccatgtactctctggctgtgaaagcctccgg
aagttggagatcagagattgtccctttggagacaaggctctcttggccaatgctgcaaag
cttgagacaatgcgatccctttggatgtcttcttgttcagtaagttttggagcatgtaag
ctgctagctcagaagattcctaggcttaatgttgaagtcatagatgagaggggtcctcca
gatacaaggccagaaagctgccctgtagaaaaactttacatatatcgaacagtggctgga
ccgaggtttgacacgcctggttttgtttggacaatggatgaagatacagcagtgagattg
tcttga
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