Nicotiana attenuata (coyote tobacco): 109231145
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Entry
109231145 CDS
T05870
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109231145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109231145
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109231145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
109231145
NCBI-ProteinID:
XP_019252251
UniProt:
A0A1J6I3A1
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All DBs
Position
8:complement(29528089..29542958)
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AA seq
791 aa
AA seq
DB search
MIATEGIEDEEKWLAEGIAAIQHNAFYMSRALDSDNLREALKYSALLLSELRTSRLSPHK
YYELYMRAFDELRKLEMFFREEDRHGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGVQHPTRGLFLRSYLAQISRDKLPDLGSEYEGEGDTVMDAVDFV
LQNFTEMNKLWVRMQHHGPVRLKEKLEKERSELRDLVGKNLHVLSQIEGVDLEMFKDVVL
PRVLEQVVNCKDEIAQYYLMDCIIHVFPDEYHLQTLETLLGACPQLQPAVDVKTVLSRLM
ERLSNYADSSPEVLPDFLQVEAFTKLSSAIGKVIDAQIDMPVVGAISLYVSLLTFTLRVH
PDRLDYVDQVLGACVKKLSGKAKLEDSKATKQVVALLSAPLEKYTDIVTVLTLSNYPRVM
DHLDTGTNKIMAKIIIESIMKNDTSVSTADKVEVLFELIKGLIKDLDGTATDELDEEDFK
EEQNSVARLIHMLYNDEPEEMLKIICTVRKHIMAGGPKRLTFTVPPLVFSALKLVRRLQG
QDGDMAGEEVPATPKKIFQLMNETIEALSSVPSSELALRLYLQCAEAANDCDLEPIAYEF
FTQAFVLYEEEVADSKAQVTAIHLIIGTLQKMTVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQQANVTRGSSGPVTLFVEIL
NKYLYFFEKGNPQITPGAIQSLIELIKTEMQSDATTPDSASDAFFTSTLRYVQFQRQKGG
LMGEKYNPIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaaccgaaggaatcgaagacgaagagaaatggctagcggaaggcatcgccgct
attcaacacaacgcattttacatgtctcgtgctttggattcggataatcttcgagaagca
ttgaagtattctgctttattattatctgagctccggacttcgagactttcgccgcacaaa
tactacgagctctatatgcgagcttttgatgaattgaggaagctggagatgttcttcaga
gaagaagatagacatggttgttcagttattgacttatatgaactcgttcaacatgctgga
aatatattgcctcggttgtatctcctatgtacagtaggatctgtttacatcaaatcaaaa
gaggctcctgctaaggatattctcaaggatcttgttgaaatgtgtcgtggtgttcagcat
ccgacacgtggtctcttcttgaggagttatcttgctcaaattagtagagacaaattgcca
gacttaggttctgagtatgaaggagaaggcgataccgtcatggatgctgtagattttgtg
ctgcagaacttcacagagatgaataaactttgggttagaatgcagcatcatggacctgtc
aggttgaaagagaaactggaaaaagaaaggagcgagcttcgtgatcttgttgggaagaat
ttgcacgttcttagtcagatagagggtgttgatcttgaaatgttcaaggatgtggttctg
cccagagttttggagcaggttgtcaattgtaaggatgagattgcccagtattatctgatg
gactgcataattcacgtctttccagatgagtaccacttgcagacacttgaaaccttattg
ggtgcttgtccgcaactccaacctgctgttgacgttaagactgtgctgtcacgattgatg
gagagattgtcaaactatgctgattcaagtcccgaagtgttacctgacttccttcaagtt
gaagcatttaccaagctaagcagtgccatcgggaaggtcattgatgcacaaattgatatg
ccagttgttggagccatttctttgtatgtatctctactgaccttcactctccgtgttcat
cctgatcgactagactacgtggatcaagtactgggagcatgtgtcaagaaactttctggt
aaagcaaagcttgaggatagtaaagcgacaaaacaagttgttgctctcctgagtgcaccg
ttggagaaatacactgacattgtgacagttctaactctttcaaattatccacgtgtcatg
gatcaccttgatactggaacaaataagatcatggcgaagataatcattgagagcatcatg
aagaatgacacctctgtatcaactgctgacaaggttgaggttttgtttgaattgataaaa
gggcttatcaaggacttggatggaactgctaccgatgagctcgatgaggaggatttcaag
gaggaacagaattctgttgctcgtcttatacacatgctctataatgatgaacctgaggaa
atgttaaagataatatgcactgttaggaagcatataatggctggaggtccaaagcgccta
acttttacagttcctcctctagtcttttctgcattgaagttggttaggagactgcaaggt
caggatggagatatggctggagaagaggttccagctacaccaaagaaaatttttcagtta
atgaatgagactatcgaggctctttcatcagttccgtcgtcagaactggcattgagattg
tacttgcagtgtgcagaggctgccaatgattgtgatcttgaaccgattgcatatgaattt
tttacacaagcttttgtactatatgaagaagaagttgcggattcaaaagctcaagtgact
gcaatacacttgataattggaactcttcagaagatgactgtgtttggtgttgagaacagg
gataccttgactcataaggccacagggtattcagcaaaacttctaaagaaacctgatcaa
tgtagagcagtttatgcttgttcacatctcttttgggttgacgatcaagatggtattaaa
gatggagaaagggtcttgctttgcctaaagcgttcgttgcggattgctaatgcagcacag
caacaggcaaatgttacaaggggtagcagtggacctgtcacactttttgttgaaatactt
aacaagtacctctatttttttgagaaggggaaccctcaaataacacctggtgcaattcag
agccttatagagttgattaaaactgagatgcagagtgatgccacgaccccagattctgct
tcggacgctttcttcaccagcacattgcgttatgttcaatttcagagacaaaaaggaggg
ctaatgggagagaaatacaatccaattaaggtgtga
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