Nicotiana attenuata (coyote tobacco): 109231232
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Entry
109231232 CDS
T05870
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109231232
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109231232
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109231232
NCBI-ProteinID:
XP_019252364
UniProt:
A0A1J6I582
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Position
8:33614507..33616383
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AA seq
396 aa
AA seq
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MGISKTKINGLIVLLFFTFVAVGIAVPDNSTRRHLSKKYKGPCVAANLIDKCWRCNPRWA
DDRQKYADCAMGFGRNAIGGKGGRIYVVTDPSDDNVENPVPGTLRYAVIQKEPLWIIFSK
HMKIKLNRELLMQSYKTIDARGHNVHIEKGAGIKMQGVNNIIITNLHIHNIGPTSGGMIR
DSIDHIGIRGADEGDAISIFASHDVWIDHVSMSRAADGLIDAVQGSTGITISNCHFTDHD
KVMLFGANDNYLDDKKMQITLAYNHFGKRLDQRMPRCRLGFFHLVNNDYTHWMRYAIGGS
SEATIISQGNRFIAQYNVDIKEVTHREKAQESEWRHWTWLSQDDDMQNGAFFRTSGDPNA
LSKFKNLNLMPAEPSYRVGILTKFSGSLGCTVGRPC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctcaaaaacaaaaatcaatgggcttattgtcctcttattcttcacatttgtt
gcagtaggaatagcagtgccagacaacagcacaagaaggcacttgtccaaaaaatacaaa
ggaccatgtgttgctgcaaatcttattgacaaatgctggagatgtaaccctcgttgggct
gatgatcgccaaaaatatgctgattgtgcgatgggtttcggccgtaatgctattggagga
aaaggtggaaggatttatgtagtcacagatccttctgacgacaacgtcgaaaatcccgtg
ccaggtaccctaaggtacgcagtgatccagaaggaacccttgtggatcatattctcaaaa
catatgaaaattaagttgaacagggaattgcttatgcaaagctacaaaaccattgatgca
cgtggacacaatgtccatattgaaaaaggagctggaattaagatgcaaggtgtaaacaac
attatcatcactaatcttcacattcacaacattggacctacttctggtggcatgatcagg
gactcaatagaccacataggtatcaggggtgcagatgaaggagatgctattagcatcttc
gcttctcatgatgtttggattgaccacgtgtcgatgtcacgtgccgcggacgggctcatc
gatgccgtccaaggatctactggtattaccatctctaattgccactttactgaccacgat
aaagtaatgttgtttggtgcaaatgataattacctggacgataagaaaatgcaaatcaca
ttagcgtacaaccactttggtaagaggttggatcaaaggatgccaaggtgcaggcttgga
ttcttccatcttgtcaacaacgactacacccactggatgaggtacgccattggcggtagc
agtgaagcaacaatcattagccagggtaaccgttttattgctcaatacaatgttgatatt
aaagaggtgacacacagggaaaaggcacaagaatcagaatggagacactggacttggtta
tcacaagacgatgacatgcaaaatggtgctttctttagaacttctggtgatccaaatgca
ctaagcaaattcaagaacctcaatttgatgccagcagaaccatcttacagagttggaatt
cttactaagttttcaggatcactcggttgcacagtaggacgcccatgctag
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