Nicotiana attenuata (coyote tobacco): 109231256
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Entry
109231256 CDS
T05870
Name
(RefSeq) protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109231256
Membrane trafficking [BR:
nau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109231256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
109231256
NCBI-ProteinID:
XP_019252404
UniProt:
A0A1J6IX05
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All DBs
Position
8:complement(35681450..35690850)
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AA seq
1480 aa
AA seq
DB search
MASNPPFMVEDQTDEDFFDKLVNDDDDDIDFKVTASVSVDGNESDEAKAFANLSISDDVN
DNAGLENLGGVKKEGTWDDKIVDSDVKPPLVIKGGDGEKSSGSLLSLTSGGLDSLLESSN
GDLETEVTTDLSESHTSGSVNPDVKEEEENHTSGSANPGVKEVDWSVFYSNPATDGDTEV
FGSYSDFFSELGNNNTGVVIGNTGENQNVGSNVVSADQVNDSANFDSSSSYMQQNQDGFG
YNATTEQVAGGEDQNNSQYWENLYPGWKFDVNTGQWYQVSSDDSTANVQDNSAADWTVSD
GKSEVSYLQQASQSVAGTVAESGTTESVNNWNQVHQVSDATENAANWNHQVSQASDASGV
VTGWNQVSQSRDEGGITTEWNQASEVNNGYPSHMVFDPQYPGWYYDTIAMEWRSLDTYTS
SSQSTIQGESQLNQNGWVSSEDFSPNHDQSIYGAYGQNENSRSIGFGSGGHDYNGSFGKY
NQQNSNVWQTENVAKSEPVSEYRGNQPLENHYSQEISASSHVSPQMSNQYEGTISYHGKS
NQTQGNFSATAGSQGFNQQFSQPTMQQNEQKHLSSDYYGSQNTVNYSPQAFQNTQQYPYA
PTAGRSSAGRPPHALVTFGFGGKLIVMKDNSSYDSSSFGSQNPVGGSISVLNLMDVMSER
IDSSSLATGACDYIQTLCRNPFPGPLVGGNAGIKELNKWIDERIANPLFPDVDFRKGEVL
RLLLSLLKIACQYYGKLRSPFGTDTLLKEDAPETAVAKLFASLKRNGTQFSQYGTVSQCL
QQLPSEGQLRTTAAEVQSLLVSGRKKEALQCAQEGQLWGPALVLAAQLGDQFYVETVKQM
ALRQLTAGSPLRTLCLLIAGQPADVFNPESTAPSGMPIAANVAQQPAQFGANVMLDDWEE
NLAVITANRTKDDELVLVHLGDCLWKERSDIVAAHICYLVAEANIEPYSDSARLCLVGAD
HWKFPRTYASPEAIQRTEIYEYSKVLGNSQFILPPFQPYKLVYAHMLAEVGRTPDALKYC
QALSKSLKTGRTPEIETLRQLVSSLEERIKTHQEGGFATNLAPAKLVGKLLNLFDSTAHR
VVGGLPPPVPSTTSGSPQGNEHHYQSAGPRVSNSQSTMAMSSLMPSASMEKISEWAADNN
RMTMHNRSVSEPDFGRTPRQDHVDSSKEASSSNTPGNSSAAAGRSRFGRFSFGSQLLQKT
VGLVLKPRQGRQAKLGETNKFYYDEKLKRWVEEGAAPPAEEPALAPPPTTAAFQSGAPDY
NLNSVLKSEGSISNGSPDMKSPPSADNGSGIPPLPPTTNQFSARSRMAVRSRYVDTFNKG
GGNPTNLFQSPSVPSMKPATGNAKFFVPTPMSPVEQTVDSHFNEQETSGNSENNSISAVN
GSFQSPAPPSTMPMQRFPSMDSISNKGVTTGPSPLSSQSRRTASWSGGISDAFTPNKSEV
KPLGEVLGMPPSSFMPSDANLAHSSMNGGRFGEDLHEVEL
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatcctccatttatggtggaggatcaaacagatgaagatttctttgataaa
ttggtgaatgatgatgatgacgacattgattttaaggtaactgcatcggtgtcggttgat
gggaatgaatctgatgaggctaaagcatttgctaatcttagtatcagtgatgatgttaat
gataatgctggattggaaaatctaggtggagttaaaaaggaaggaacttgggatgataaa
atagttgatagtgatgttaaaccgcctttggtgataaagggaggggatggagagaagagt
agtggctccttactgtcattgacttcgggcggattagatagtttgctcgagtcaagcaat
ggtgatttggagactgaggtaactactgatttgtcggaaagtcatactagtggatccgtt
aatcctgatgtaaaggaggaggaggaaaatcacactagtggatccgccaatcctggtgta
aaggaggttgactggagtgtgttttattctaatccagctacagatggtgatacagaggtt
tttggatcttactctgactttttcagtgaattggggaataataatactggagttgttatt
ggaaacacaggggagaatcaaaatgtggggtcaaatgttgtatcagctgatcaagttaat
gattccgcgaattttgacagttctagttcgtacatgcagcagaatcaagatggttttggc
tataatgcgactacggaacaagttgcaggcggggaagatcaaaataacagtcaatattgg
gagaatctttatccaggatggaaatttgatgtaaatactgggcagtggtatcaggtctct
agtgatgactcaacagccaatgtacaagataattctgctgctgactggactgtttctgat
ggaaagtcagaagtctcttacttacagcaagcttctcagtctgttgctgggactgtagcc
gagagcgggaccactgaaagtgtcaataattggaatcaggttcaccaggtaagtgatgcg
actgagaatgcagcgaattggaaccaccaagtttctcaggcaagtgatgcgagcggggta
gtgacaggctggaatcaggtgtctcagtcgcgtgatgaaggtgggattacgactgagtgg
aatcaagcttcagaagtaaacaatggatacccttcgcatatggtttttgatcctcaatac
cccggttggtactatgataccattgccatggagtggcgctctctcgacacatatacttca
tctagtcaatcaactattcaaggtgagagccagctgaatcagaatggttgggtatcatct
gaagatttttctcccaatcacgatcaaagtatttatggtgcatatgggcagaatgagaat
agtagatccataggatttggcagtggagggcatgattacaatgggtcttttggtaaatac
aatcagcaaaactcaaatgtgtggcaaaccgaaaatgttgccaagagtgagcctgtgtca
gaatatagggggaaccagccattggagaatcactacagccaagagatttctgctagcagc
catgttagtccgcaaatgtctaatcagtatgagggaacaatttcataccatgggaaatca
aatcaaactcaaggtaatttctcagcaacggctgggtcacagggctttaatcagcaattt
agtcagccgacaatgcagcaaaacgagcagaagcatctttcaagtgattattacggaagt
caaaacacagtcaattattccccacaagcatttcagaacacccagcaatatccttatgct
cctaccgcaggaagatcatctgctggtcgtcctcctcatgctttggtcacctttggtttt
ggtggaaagttgatcgtgatgaaagataatagctcttatgatagctcatcctttggcagc
cagaatcccgttggaggttcaatatctgtgcttaacttgatggatgtgatgtcagagaga
atcgacagttcaagccttgcaactggggcatgtgactatatccaaactctctgccgaaat
ccattccctggtcctttggttggtggaaatgctggtattaaggagttgaataaatggatt
gacgagaggattgcaaaccctttattccctgacgtggatttcaggaaaggggaagttttg
aggttgcttctgtcattgctgaaaatagcatgtcaatactatgggaaacttcgatcccca
tttggtactgatactttgttgaaggaagatgctccagaaacagcagttgccaaattgttt
gcatctctgaagaggaatggtacacaatttagccaatatggtactgtttcccagtgcttg
cagcaattgccttctgaaggacagttgcggactactgctgctgaagttcaaagtcttcta
gtttctggaagaaagaaagaagcattgcaatgtgcacaagagggtcagttatggggtcca
gctcttgttctcgctgcacaacttggtgatcagttttatgtcgaaactgtgaagcaaatg
gcactccgacaattaacagcaggatcacctttgcggacactctgcctgctaattgcaggt
caaccagctgatgtctttaatccagaatctacagctccaagtggcatgcccattgcagca
aatgtcgctcaacagcctgctcagtttggtgctaatgtcatgcttgacgattgggaggag
aatttggctgtgatcactgcaaatagaacaaaggatgatgaattggtgcttgttcatctt
ggtgattgtttgtggaaagagagaagtgatattgttgctgcacacatttgttatctggtg
gcagaagcaaacattgaaccatattcagacagtgcaagattgtgtcttgttggcgctgat
cactggaaattcccccgaacttatgctagtccagaggctattcagaggactgagatatat
gaatactcgaaggtgcttggaaactctcaatttattcttcctccttttcaaccttacaag
cttgtatatgcacacatgttagctgaagttgggagaacgccagatgcattgaagtactgt
caagcgttgtctaaatcgcttaaaactggccgaactcctgagatagaaacattgagacaa
ttagtgtcatctcttgaagaaaggatcaaaacacaccaagagggagggtttgccacaaat
ttggctcctgcaaagttggttggtaaattgcttaacctttttgatagcactgctcaccgt
gtggttgggggcttaccaccgccggttccttcaacaacaagcggcagtccacaagggaat
gaacatcattatcagtctgcgggacctcgagtctcaaatagtcaatcgacaatggcgatg
tcatctttgatgccttcagcatccatggagaaaataagtgaatgggcagctgacaacaat
agaatgacgatgcacaatagaagtgtttcagagcccgactttggaagaactcctagacag
gatcatgtcgactcatcaaaggaagcaagctcaagtaacacaccaggtaattcatcagca
gctgcaggtagatcacgctttggtcgctttagttttggctctcagcttctccaaaaaacg
gttggattagtccttaaaccccgacaaggccgtcaggccaaactgggtgaaacaaataaa
ttttattatgatgaaaaacttaaaagatgggttgaagaaggtgctgcgcctcctgctgag
gaaccagctcttgcaccaccaccaaccactgctgctttccagagcggggcacccgattat
aacttgaatagtgtactaaaaagtgaaggttctattagcaacggaagtccagacatgaag
agtccaccttctgctgataatggttcaggaatcccaccacttccaccgaccactaaccaa
ttctcagcacgcagtcggatggctgttcggtcaaggtatgtcgacacattcaataaaggt
ggaggtaatccaacaaatcttttccaatcgccttctgttccttccatgaaacctgctact
ggaaatgcaaagttctttgttcctacgccaatgtcccctgttgaacaaacagttgatagt
catttcaatgagcaagagacttcaggaaatagtgagaataattcaatctctgctgtgaat
gggtcattccagtctcctgcacctccatcaaccatgcctatgcagagatttccaagcatg
gacagcatctctaacaagggggtaactactggacctagccccctgtcaagtcagtcacgg
agaactgcatcatggagcggaggcatttctgatgctttcaccccaaataaatctgaagta
aaaccacttggtgaggtattgggtatgcctccatcatcattcatgcctagtgatgctaat
ttggcgcactcctcgatgaatggtggtagatttggtgaagatctacatgaagtagaactg
tga
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