Nicotiana attenuata (coyote tobacco): 109231798
Help
Entry
109231798 CDS
T05870
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109231798
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109231798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
109231798
NCBI-ProteinID:
XP_019252980
UniProt:
A0A1J6INN6
LinkDB
All DBs
Position
8:complement(16793416..16796259)
Genome browser
AA seq
400 aa
AA seq
DB search
MVSLASASFSVCLFVFLCIANAQYYNSPLKFFNVLDYGAVADEKRDNGQAFLKAWEDACQ
WRGRSMVLIPYGTYMLRSVSFEGPCRSLMRFVIKGVLKAPTSPSLFNTNTWIGFRYINGL
VVKGGGYLDGQGASAWPYNDCSKNPHCMPLPVTLRFDFVTNSRIHHLRSINSKNSHINLF
ACNNINISFVRMTAPGDSPNTDGIHIGASTNIRISRTVIQTGDDCISMVTGSRNIDISDV
TCGPGHGISIGSLGKSPGEFVTGINVRNCTFIGTQNGARIKTWAPSLSSEASDIFFGDIY
MQNVNNPILIDQQYCPYPSCSNLGHDNSKVQISNVTFSNIWGTSSSKVAVTLKCSKLVPC
KNVQLNNINLAYHGRGGPATSSCLNVIGASYGKQSPPSCL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattggcttctgcaagttttagtgtgtgcttgtttgtattcttgtgcatagct
aatgcccaatattataattcaccacttaagttcttcaatgttttggattatggtgcagtt
gctgatgagaagagagataatggccaggcatttttaaaggcatgggaagatgcttgtcag
tggagaggaaggagtatggttttaattccctatggaacttacatgttgaggtcagtttca
tttgagggtccatgtaggagtttaatgagatttgtaataaaaggggttcttaaagctccc
acaagtccatcattgttcaacacaaatacttggattggttttcgttacataaatgggcta
gttgttaaaggtggtggctatttggatggccaaggtgcttctgcttggccatataacgat
tgttccaagaacccccattgcatgcctcttcctgtgactttgagattcgatttcgtgacg
aattcaagaatccatcatttgagatcaatcaacagcaagaactcccacataaacctcttt
gcgtgcaacaacataaacatcagtttcgtacgaatgacagctcctggggacagccccaac
accgacggcattcacatcggagcttcaactaacatcagaatttcaagaactgttattcag
accggcgatgactgcatttccatggttacaggcagccgaaacatcgacatttccgatgtt
acttgtggacctggtcatggaattagcattggtagtctaggaaaatcacctggagaattt
gttacaggcataaatgtgagaaattgcacatttattggtactcaaaatggggcaaggatc
aaaacttgggcaccgtctttgtcaagtgaggcttctgatatattttttggtgacatttac
atgcaaaatgtcaataatccaatcctcattgatcaacaatactgcccatatccttcttgc
agcaatctgggacatgacaattctaaagtacaaataagcaatgtgacattcagtaacata
tggggaacatcaagttcaaaggttgcagtcactttaaaatgtagtaaattggtgccctgt
aagaatgtgcagcttaacaatatcaacttggcataccacggacgaggaggaccagccacg
tcttcgtgtttaaatgtgattggtgcttcatatgggaaacaatctcctcctagttgttta
tga
DBGET
integrated database retrieval system