Nicotiana attenuata (coyote tobacco): 109231901
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Entry
109231901 CDS
T05870
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109231901
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109231901
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
109231901
NCBI-ProteinID:
XP_019253048
UniProt:
A0A1J6JPD2
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Position
1:109060735..109066086
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AA seq
401 aa
AA seq
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MAIPKELLFLLLGIAILSKVAECASFGSRRGLVETVFDVTRFGATPNTPADSTRGLMMAW
RSACQSPGPAKVVIPPGTFTTGETIFQGPCTSPRPITIEIQGTLLSNTDMSLYTRAAWIS
IEHVDGIVITGGGTLNGQGKSSWQFADKSGSTPPLPSSLVFQTVRSSSIKNLNFVDAKGV
HLKITDSSDISVSNIIITAPGDSPNTDGLHISETINVNVTDSTIGTGDDCISIGDGNSNV
YISNINCGPGHGISIGSLGKRLDETDVKGVTVRNCTFRGTTNGARIKTYMGSPSLQVSGV
VYEDIILDNVKNPIVIDQHYHSKNRNEPSRVKLVDIHFKNIRGTTTSKIPVALNCSEALP
CEGVELVDIDLAPVGPIGPLLPATCQNAKTILNGKNNPPAC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctattccaaaagaattattgtttttacttttgggtatagccattttgtcaaaagtt
gctgaatgtgcatcttttggttcacgtcgtggccttgtagagacagtttttgatgttaca
aggtttggagctacaccaaatacccctgcagatagcactaggggacttatgatggcatgg
agatcagcttgccaatcaccaggaccagccaaagttgttattcctccaggaacatttact
acaggagaaactatatttcaaggaccatgcacaagtcctaggccaattactattgaaatt
caaggaactttgttgtcaaatactgacatgagtttgtacacaagagcagcttggatttct
atcgaacatgttgatggtattgttattactggtggaggaactctaaatggacaaggaaaa
tcgagttggcaatttgctgataaatctggaagtactcctcctcttccctcttctcttgta
tttcagacagtgcgaagttcttcgatcaagaacctcaattttgtggatgccaaaggtgtc
cacttgaaaatcaccgatagcagtgatatctcagtttcaaatatcataattacagctcca
ggagatagtccaaacactgatggtcttcatattagtgaaactattaatgttaatgtcact
gatagcaccattggaacaggtgatgattgcattagtattggagatggcaattctaatgtt
tatatctctaatataaattgtggcccgggacatggtataagtattggcagccttgggaaa
agattagatgaaacagacgttaaaggagttacagtaagaaattgtacattccgtggcaca
acaaatggtgcaagaatcaaaacttatatgggctcaccttcactacaagtttctggtgtt
gtttatgaagatataatcctagataatgtcaaaaatccaatcgttattgatcaacactat
cattccaagaacaggaatgagccatctagagtgaaactagtggatattcacttcaagaac
ataagaggaacaacaacttcaaaaattccggtggcactcaattgcagtgaagcacttcca
tgtgaaggagttgaattggttgacattgatctagctccagttggtccaattggacctctt
ttgcctgcaacttgtcaaaatgctaaaacaatattgaatgggaaaaataacccaccagca
tgctaa
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