Nicotiana attenuata (coyote tobacco): 109231970
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Entry
109231970 CDS
T05870
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109231970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109231970
03051 Proteasome [BR:
nau03051
]
109231970
Membrane trafficking [BR:
nau04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
109231970
Proteasome [BR:
nau03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109231970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
UBA_7
Ddi2_HDD
CSTF2_hinge
Dsc3_N
Rad60-SLD_2
TBK1_ULD
XPC-binding
Motif
Other DBs
NCBI-GeneID:
109231970
NCBI-ProteinID:
XP_019253126
UniProt:
A0A1J6IT61
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All DBs
Position
9:3065197..3077692
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AA seq
553 aa
AA seq
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MSMVGGDSNKENNTGAGAGAGAGAGEGVTINVRCSNGSKFSVKVNLDATVGSFKSILVQH
ANIPAENQRLIYKGRILKDEQTLESYGLEADHTVHLVRGSGPAPSANPASSTNVGGPNTD
QHAPRDAASNVGGPFPGSGLGASLFPGLGSGGGGLFGAGLPDFEQVQQQLTQNPDMMRDM
LNMPLVQNLMNNPETIRNMIMNNPQMREIMERNPELAHVLNDPATLRQTMEAARNPELMR
EMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPLLNATTLSGDTRNDVGSNPFAALLGAQ
GGGQGRHQSNNPPTSGSETTDNPPAPNTNPLPNPWASAGTGAAQANTTARSNTAGDTRAA
PLGGLGGLASPGLEQMLSGMPDTTSLNQMMQNPAISQMMQSLLSNPQYMNQVLGQNPQLR
SMLDSNSHLREMMQNPDFIRQLTSPETMQQLMTFQHGLLSQAWRQQTDQQLGQNAGGADS
GMEMLMNMFGGLETGGLGVPNRSNVPPEELYATQLTQLQEMGFFDTQENIRALIATAGNV
HAAVERLIGNSGQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggtcggcggcgattcaaacaaggagaataacaccggcgccggtgccggtgcc
ggtgccggtgccggcgaaggtgttacaatcaacgtccgatgttccaacggctcgaaattc
tccgtgaaagttaacctcgatgcgaccgtaggatccttcaagtctattcttgtacagcac
gcaaacattcctgctgaaaatcagagattgatctataaaggccgtatcttaaaagacgag
caaacacttgaaagctacggtctggaggcggatcacactgtgcatttagttcgaggttct
ggcccagctccatctgcaaaccctgcaagttcaaccaatgttggaggtccaaatacagat
cagcatgcaccaagagatgctgcttcaaatgtaggtgggccatttccgggatcaggcctt
ggagcttcactgtttcctggtcttggaagtggtggtggtggtttgtttggagctggactt
ccagattttgagcaggtccagcagcagttgactcaaaaccccgacatgatgagagatatg
ttgaatatgcctctagttcagaatttaatgaataaccctgaaaccattcgcaacatgatc
atgaataatccccaaatgcgagagatcatggagcgtaatcccgagcttgctcacgtactc
aatgatcctgctactcttcgacagacaatggaggctgcacgaaaccctgaacttatgcgt
gagatgatgcgcaatactgacagggccatgagcaatattgaatcttctcctgagggattt
aacatgctgaggcgtatgtatgaaaatgtccaagagccactcctaaatgcaacaacattg
tctggagatacgagaaatgatgtggggtctaacccgtttgcagctcttttgggagcacaa
ggtggtgggcaaggcagacaccagtcaaataatcctccaacttccggttctgagacaact
gataatccgcctgctcctaatactaatccacttcctaatccttgggcatctgcaggcact
ggagctgcccaagccaataccactgctaggtcaaatactgctggcgatactagggctgca
ccacttggtggcttaggtggacttgcttccccaggtttggagcaaatgctaagtggcatg
ccagataccacttctctaaatcaaatgatgcagaaccctgcgatctcacagatgatgcaa
tctctcctctcaaatcctcaatacatgaaccaggttttagggcagaacccacagctaaga
agcatgctcgactccaactcccatcttagagaaatgatgcaaaaccctgattttattcgt
caattgacatcacctgagacaatgcagcaacttatgacttttcagcatgggcttttgtct
caagcttggcggcagcaaacagaccaacaactgggtcaaaatgctggtggagcagacagc
ggaatggaaatgctgatgaacatgtttggtggacttgagacggggggcttgggtgtccct
aacagatccaatgtgccgccagaggaattatacgctactcagctaacgcagttacaagaa
atgggtttcttcgacactcaagaaaacatccgggcactgattgccactgcaggcaatgtt
catgctgcagtagagcgacttattggaaattctggacagtag
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