Nicotiana attenuata (coyote tobacco): 109231976
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Entry
109231976 CDS
T05870
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nau03400
]
109231976
Enzymes [BR:
nau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109231976
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109231976
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
109231976
NCBI-ProteinID:
XP_019253134
UniProt:
A0A1J6ICW9
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Position
9:complement(3344517..3359566)
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AA seq
591 aa
AA seq
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MKKGMKIVTYNVNGLRPRIQQYGSLPKLLDSLDADIICFQETKLSKHDLRADLVRAEGYE
SFFSCTRTSDRGRSAGYSGVATFCRVKSAFLSNEVALPIAAEEGFTGLLRTSNGYESRKD
ECPSIAEGLECFSRDELLKADSEGRCLITDHGHFVLFNIYGPRAVQDDSERIQFKLTFFK
MLERRWECLLHQGRRIIIIGDLNIAPAAIDRCDAEPDFEKNEFRKWFRSLLLQNGGRLLD
VFRAKHPDRKGAYTCWSQSTGAEEFNFGSRIDHILSAGSCLHGEENQEGHDFGTCHVAEC
DILMQFQRWKPGNTPRWKGGRSIKLEGSDHVPVYTSLVEIPEVLEHSTPSLSTRYHPQVY
GSQQTLVSMFTRRQSIEQVISEERVSPLFPSHEKFTSTPENYDSKASQIRVLGSRSNANI
LPSIVAKKKSRHGQGSQLTLNSFFQKCTRSETSDSSSADSKICQTDISYSQTDLNGVPSA
DDESGPSKDCRLNAIDNIQNEGHVDACDSDKEKRKVALQEWQRIQQLMQNSVPLCKGHRE
PCVPRIVKKAGPNLGRRFYVCARAEGPASNPEANCGYFKWAAASKCKEKGK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaatgaagatagtgacgtacaatgtgaacggcttaaggccgcgcatacaa
caatacggttcacttccgaaacttctagattcactcgacgctgatatcatctgttttcag
gagactaaattgtccaaacatgatttacgagccgatttggttcgtgctgagggttacgag
tctttcttctcttgtactcgtacttctgatcgtggccgctccgctggctattccggtgtt
gcaacattttgccgtgtaaaatctgcattcttgagcaatgaggtagctctgccaattgct
gcagaagagggcttcactggtctcctcaggacatctaacggatatgaatctagaaaggat
gagtgtccttcaatagcagaaggccttgagtgcttttctagagatgagcttcttaaagct
gatagtgagggacgttgtctgattactgatcatggtcattttgttctattcaatatatat
gggcccagagctgttcaggatgactctgagagaatccaatttaagctgacgtttttcaag
atgttagagagaagatgggagtgtctcctgcatcaaggaaggaggattatcatcataggg
gatctcaatattgctcctgctgccatagaccgctgtgacgcagaacctgattttgagaag
aacgagttcaggaaatggtttagatcgttattattgcagaatggagggcgtctccttgat
gtttttagagcaaaacatcctgatagaaaaggagcctatacttgctggtcgcagagtaca
ggagccgaggaatttaattttggttctaggattgaccatatacttagtgcaggatcatgc
ttgcatggtgaggaaaatcaagaagggcacgactttggtacttgccatgttgcagagtgt
gacatattgatgcaatttcaaaggtggaaacctggaaatacgccaaggtggaaaggaggg
aggagcatcaaattagaaggttctgatcatgttccagtttacacgagtttagtggaaatc
cctgaagtattggagcatagcaccccatcattgtctaccagataccatccccaggtctac
gggagtcagcaaactcttgtgtctatgttcacaagaaggcaatcaattgagcaagttatt
tcagaggaaagggtaagccctctgttcccaagtcatgaaaagtttacctcaacgccagag
aactacgatagtaaagcttcgcaaattagggtgcttggttctcgaagtaatgctaatatt
ctgccgagcattgtagccaagaagaaatcaaggcatggtcaggggtctcagctcacgctc
aactcattcttccagaaatgcactagaagcgagacttctgacagtagctctgctgattct
aaaatttgtcagacagacatttcttactctcagactgacctcaatggagttccttctgct
gatgatgaaagtggtccttcaaaggactgcagattaaatgctattgacaatattcaaaat
gaaggccatgtagatgcatgcgattcagataaagagaagaggaaagtggcattacaggag
tggcaaaggattcaacaattaatgcagaatagtgtacctctttgtaagggccatcgagaa
ccttgtgttccacggattgttaaaaaagcaggccccaatttgggccgcagattttatgtc
tgtgctcgagctgagggacctgcatcaaatcctgaagcaaattgtggttatttcaaatgg
gctgctgcttcaaaatgtaaggagaaaggaaagtga
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