Nicotiana attenuata (coyote tobacco): 109232323
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Entry
109232323 CDS
T05870
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nau03016
]
109232323
Enzymes [BR:
nau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
109232323
Transfer RNA biogenesis [BR:
nau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109232323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
109232323
NCBI-ProteinID:
XP_019253599
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All DBs
Position
9:42710661..42719500
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AA seq
386 aa
AA seq
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MNMKRKREDMEIVWQTPANPPERHDYVFRNGIRYVRPYYFEFISHVKNRWAGKTIVDLFS
EEFKGRPRDYYESAVKSGRIQVDGQKVHLSYVVQSSQKISHFLHRHEPPVMSWDVEILCE
EPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSAS
RADLFRQQIESGAVQKQYIARVIGVFPDKQQVVNANVNYNAREGRSTVEVGDDQGNSTAS
LKGKTACTKFTRISTNEKHSIVSCEPVTGRTHQIRVHLQYTGHPIANDMLYLSELVSNRS
AEGLSADRAAAKSFSPPEPISLENGISDTTNDSNEGFSVDPMCTNCPNLAPKGYEGNEEG
LWLHCVKYSGPDWIYECPLPDWASLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaaaggaagcgagaggatatggagatagtgtggcaaactcccgccaaccca
ccggaacgccatgactacgtcttccgcaatggaatacgctatgtcagaccttactacttc
gaattcatttctcatgtgaagaatcggtgggctgggaagacaattgttgatctcttctct
gaagaatttaaagggagacctcgtgattactatgaatccgctgttaaatctggacgtata
caagttgatggacaaaaggtgcatctttcatatgtagtgcagtcatcacaaaagattagc
catttcttgcacaggcatgaaccaccagtgatgtcatgggatgtcgaaatactatgtgaa
gaaccagacgtgctgacagtttgcaagcctgcttctgttccagttcatccatgcggacaa
taccgcaagaatacggtcgttggtatactacaagctgagtatggcttggcacctttgttt
ccggttcatcgcttagatcgcttagtctcaggactacttatcttggctagaagtgcttct
agggctgacctcttcaggcaacagatagaatcaggagcggtgcagaaacagtatattgcg
agagtgatcggagtgttccctgataagcagcaagttgtgaatgctaatgtcaattacaat
gcccgagaagggagaagcacagttgaggtgggggatgaccagggaaatagtactgcttca
ctgaagggaaagactgcatgtaccaaatttacaaggattagtaccaacgagaagcacagc
attgtttcgtgcgaacccgtcaccggcaggacacatcagatacgtgtgcatctgcaatat
acaggtcatcctatagccaatgatatgctctacctgtctgaactcgtgtctaatcgttct
gctgaagggttgagtgcggatagagctgcagctaaatcattttctcctccagagcccatc
tctcttgaaaatggcattagtgacacgacaaatgactccaatgaaggtttcagcgttgat
cctatgtgtacaaattgtccaaatcttgctccgaaagggtatgagggaaatgaagagggt
ctatggttgcattgtgtaaaatattcaggacctgactggatatatgaatgtccacttcca
gattgggcatccctaagttga
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