Nicotiana attenuata (coyote tobacco): 109232449
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Entry
109232449 CDS
T05870
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
nau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109232449
03460 Fanconi anemia pathway
109232449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109232449
03400 DNA repair and recombination proteins [BR:
nau03400
]
109232449
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109232449
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Topoisomerases
109232449
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109232449
FA (Fanconi anemia) pathway
109232449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
109232449
NCBI-ProteinID:
XP_019253767
UniProt:
A0A1J6IV24
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Position
9:50790232..50803748
Genome browser
AA seq
864 aa
AA seq
DB search
MAPKVLMVAEKPSIALSIASVLSGAQISTRRASTEVHEFDGMFLGSRAHYRVTSVIGHVF
SVDFPAAFQDWANTNPSDLFQAPILKKESNPKAHICRHLSQEARGCSHLVLWLDCDREGE
NICFEVIECTGFHTNDGRRIYRARFSSVTEKDILKAMSSLVEPNRDEALAVDARQEIDLK
VGVAFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRYLQITMFKPEKFWMLHPYI
MYKGYGLKLEWERGRLFDADVAAMFRNRLMEDGTMRVVRVSEKLESKGRPSGLNTVNLLK
VASSALGFGPQLTMQLAERLYTQGFVSYPRTESTAYPSSFDFRGTLVALVHNPVFGGYAQ
KLLTESYNKPRAGTDAGDHPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRR
IKVEFESGGEQFQCIGQLLTVKGFTSIMPWLAISEKNLPDFAEGEKIEISKVDLDEGNTS
PPDYLNESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLVPTPLGISLIRGYQ
CIDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLDQFRRKFSYFVKQIENMDALFEA
QFSPLSDSGRLLSKCGKCLRYMKYISTQPSRLYCGTCEEVYYVPQKGTVKLYKELTCPLD
NFELLLCSMPGPEGKSFPLCPYCYNCPPFEGIDTFFGAPKTGDSSKLGKGVGMPCFLCPH
PTCLHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVSLPEGAHRISTTQDKCP
ECDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRRGRGRGKG
RGSYRGRGRGNNKQQDPKMSFRDF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaaagttctcatggtagcagagaagcctagtattgctttatcaattgcctca
gttttatctggtgctcaaatatcaacacgaagggcaagtacagaagtccatgagtttgat
ggaatgtttcttggatcacgtgcacattatagagtcacttcagtaattggtcatgttttc
agtgtagattttccagccgcttttcaagattgggcaaatacaaatccttcagatcttttc
caggcaccaatacttaagaaggaatcaaacccaaaggctcatatttgtaggcatctaagc
caggaagctcgtggttgttcacatctggtactatggttggattgtgatcgtgaaggagaa
aatatatgctttgaagtcatagagtgcactggatttcacacaaacgatggtagaagaata
taccgggctcgattctcatctgttactgaaaaagatattctgaaggcaatgagcagcctc
gttgaacccaacagagatgaggcattggcagtagatgcacgtcaagagattgatttgaaa
gttggagttgcatttacacgtttccagactagctatttcaatgggaaatatggaaatctt
gatgcaagggttatctcctatgggccatgtcaaactccgactcttggattttgtgtggat
cgttacctgcaaattactatgttcaagccagaaaagttttggatgctgcatccatacata
atgtacaaggggtatggactcaaattagaatgggaacgtggcaggttgtttgatgctgat
gttgctgcaatgtttcggaatagactaatggaggacgggactatgagagttgttcgtgta
tcagaaaagctggaatctaaaggtcgtccttctggtctaaacacagtaaatcttctaaag
gtagcttcaagtgcactgggctttggtccccagctaactatgcaattggctgagcgtctg
tacactcaaggttttgtcagctatccacgtaccgagagcacagcatatccttcttcgttt
gacttcagaggaacactggtagcattggtgcataatcctgtatttgggggttatgcgcaa
aagcttttaactgaaagttataataagccgcgggcaggaactgatgcaggtgatcatcct
ccaataactccaatgcgttcagctagtgaggatagtttggggaatgatgcatggaaattg
taccagtacatctgccagcattttctgggaactctctctcccgattgcaaatatagaagg
ataaaggttgaatttgaaagtggcggagagcaatttcagtgcattgggcagcttctcaca
gtcaaaggattcacctctattatgccatggctggctattagtgagaagaatcttcctgac
tttgctgaaggagagaaaatcgagatttctaaagttgatctagatgaggggaatacttcg
cctccagattacctcaacgaaagtgagctgatctctttgatggagaaacatggtattgga
acagacgcgtcaatctctgtgcatattaacaacatatgtgaacgcaactatgtccaggta
caagctgggcgaagattggttccaactcctctgggcatcagcttgataagagggtaccaa
tgcatagattctgatctctgtttgcctgacatacgaagtttcattgagcatcagatcact
ttagtagctaaaggtcaagcagatcattcaatggttgtgcagcatgtactagatcaattt
cgaaggaagttcagttattttgttaagcagattgaaaatatggatgcattatttgaagca
caattttctccactctctgactctggacgcctccttagcaaatgtggcaaatgcttgcgg
tatatgaaatacatatctactcagccatctcgactgtactgtggtacatgtgaggaagtt
tattacgtacctcagaagggtactgttaagctgtacaaggagcttacttgccccctggat
aatttcgagctgttattatgtagcatgccaggtccagaaggcaagtcattccctctgtgt
ccttattgctacaactgtcccccgtttgaaggcatcgatacattttttggtgctcctaaa
actggtgattcttccaagttggggaagggagttggaatgccttgtttcctctgtccacac
cccacatgtctgcattccgtgattgcacaaggcgtttgtgcttgcccagaatgcagcggt
acactcgttcttgatccagtcagtgctcccaaatggaggctttactgcaacatgtgcaat
tgccttgtttccttgcctgaaggcgctcatcggatttctacaactcaggataagtgtcct
gaatgcgactcaactatcatagaagtcgatttcaacaagaaaacaactcccttaaaagat
ggagcgacgctccacaagggatgtattctctgcgacgagctgctgcattcactcgtggaa
atgaaacatggaagatcgttttctaggcatggaaggagaggacgaggtagaggaaaagga
aggggaagttatcgaggaagaggacggggcaacaataaacaacaagatcctaaaatgagt
ttccgagatttctaa
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