Nicotiana attenuata (coyote tobacco): 109232519
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Entry
109232519 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109232519
KO
K10756
replication factor C subunit 3/5
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03410
Base excision repair
nau03420
Nucleotide excision repair
nau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109232519
03410 Base excision repair
109232519
03420 Nucleotide excision repair
109232519
03430 Mismatch repair
109232519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109232519
03036 Chromosome and associated proteins [BR:
nau03036
]
109232519
03400 DNA repair and recombination proteins [BR:
nau03400
]
109232519
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109232519
DNA Replication Termination Factors
ELG1-RFC complex
109232519
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109232519
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109232519
Check point factors
HRAD17(Rad24)-RFC complex
109232519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
UPF0552
KPP10_Orf10
Motif
Other DBs
NCBI-GeneID:
109232519
NCBI-ProteinID:
XP_019253833
LinkDB
All DBs
Position
9:complement(9307602..9313013)
Genome browser
AA seq
739 aa
AA seq
DB search
MESYSASNRALQVKSSSFVKQRRSGYEPSDTETDWQESPSLELNAKNVDINVLAFDQAKN
KFSSINPRRPSKSPYKSRRDEGDVHFPGLTLRAQHVISPFSQSNVRRNISPFSKSEYRGR
HNSKEEHHLDKQSFSSSTRKQNNIVLKNSTNNDVAVCAKANYSRRAISAPRPALYDTSKD
RRRTEITRSPTSRTLSRREREREREREIPRKHEPSVGEINVILANAKISRGPNIPIGVSN
MFQSTESISPSDIFLSKEHSAFTQSSKFNSVPRTSTDKYVSSVNKMPANFNQNGRGIISS
SAIVTRRTITNSSSAISRQSSNLSDATRRTSRSAKKFITNRKKSTTQTEAWFSCIKNGSC
RNSRKDQSPERARPINEALLIEKAFVVESLRQFWADKHQPDSLEGFICNKQQALLLSHLV
SSNEPLPHMLFKGPSGSGKRALSIALLSEIYGDAICNEARPVQIVVPVSSSPHHIELNVH
LEPNARFALMALVKQISSEYALTPEVSRINMKADSKVIVLYNVDKSAENMQHLIKWIMDC
YSDACQLILFCETDASILELVKSRCTVIEVEAPATNEVMEVLIEVARMEDLELSRGFAAK
IATKSKQNLRRAIMALEACKAHNYPFAEDQPISVGWEEAVVELAAEILTDPTPTRLFSIR
GKFQKLLVEFVHPKLILLKLVEQFLKGVDGGLKREIYYWYAYYEKRLPIGTSAILKLEEF
VAKFMSIYRKRSGNIQQFL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggagagttattctgcttctaatagagcgttacaagttaaaagttcgtcctttgtgaaa
caaaggcgaagtggatatgagccatctgatacagagaccgattggcaggaaagtccaagc
ctggaactaaatgcaaagaatgttgatataaatgtattagcttttgatcaagcgaagaac
aaattttcgagtataaacccgagaaggcctagcaaatccccatataaatcgcgcagagat
gaaggtgatgttcattttcctggacttactctacgtgcacaacatgttattagtccattt
tcacagtcaaatgttcgtagaaatatcagtcctttttcaaaatctgaatatcgaggtaga
cataattcgaaagaggaacatcaccttgacaagcaaagcttttcgagttcaactagaaag
caaaataacatagtactaaaaaatagtactaacaatgatgttgcagtttgtgctaaagca
aactatagtcgcagggctatatccgctcctagacctgctctttatgacacgtccaaggat
cgaagaagaacagaaataacacgatccccaacgtcgaggaccttgtccaggagagaaaga
gaaagagaaagagaaagagaaattccgcgcaaacatgaaccttcagtaggtgaaatcaat
gtaatattagccaatgcaaagatctcaagaggccccaatattccaattggcgtgagtaat
atgtttcaaagcactgaatctatttcaccaagtgatattttcttgtctaaggaacattca
gcttttactcaatcaagcaaattcaattcagtgccccgaacatcgactgataaatatgtc
agttctgttaataagatgcccgcgaatttcaatcagaatggcaggggaattatttcatct
agtgctattgtgacacgaagaacaattacgaattcaagttctgctataagtaggcagagc
agtaatctaagtgatgctactagaaggacgagtagaagtgcgaaaaaattcataacaaat
aggaaaaagagtactactcaaacagaagcatggttttcttgcataaagaatggatcttgt
agaaactcaagaaaagatcaatctccagaaagagcgaggccgattaatgaagctttatta
attgagaaggcatttgttgttgaaagtttgagacaattttgggctgataaacatcaacct
gattcattggagggattcatttgcaacaagcaacaagctttattacttagtcatcttgtt
tcttcaaatgaaccactcccacacatgttgttcaagggtccttcaggatctggtaaaaga
gcattatcgatagctcttttgagtgaaatctatggcgatgcaatttgcaatgaagcgagg
ccagtgcaaatagttgtaccagtaagctcaagtcctcaccatattgagctcaatgttcat
ttggagcctaatgctagatttgcattaatggctttggttaagcaaataagcagtgaatat
gcgctaaccccggaagttagcaggattaatatgaaggcagattccaaagtaatagttctt
tacaacgtggataaatctgcggagaacatgcaacacttaataaaatggatcatggactgt
tattcagatgcttgtcagctcattctcttctgtgaaaccgatgcatctatactcgagtta
gtgaaaagtcgctgcacagttattgaagttgaagctcccgcgactaatgaagtaatggaa
gttctcattgaggtagcaagaatggaagatcttgaactatctaggggctttgctgctaaa
atagctacaaaatcaaagcaaaacctgagaagagcaattatggctcttgaagcctgcaaa
gcacacaactatccttttgcagaggatcaaccaatttcagtaggatgggaagaggctgta
gtagaacttgcagctgaaattctaactgatccaactcccacaaggttattttctattcgg
ggcaagttccaaaaactcttagtcgagtttgtgcacccaaaacttatactcctgaaactt
gttgaacaattccttaagggggttgatggaggtttaaaaagggaaatatattattggtat
gcttattatgaaaaaaggctcccaattggaacaagcgctatcttaaaactagaagaattt
gtagccaaatttatgagcatatacaggaaacgatcaggcaacattcagcagttcctgtag
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