Nicotiana attenuata (coyote tobacco): 109232953
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Entry
109232953 CDS
T05870
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nau01009
]
109232953
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109232953
Enzymes [BR:
nau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109232953
Protein phosphatases and associated proteins [BR:
nau01009
]
HAD phosphatases
Fcp/Scp phosphatases
109232953
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109232953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
109232953
NCBI-ProteinID:
XP_019254201
UniProt:
A0A1J6HXG0
LinkDB
All DBs
Position
10:complement(5863836..5873727)
Genome browser
AA seq
965 aa
AA seq
DB search
MYKSVVVLYEGERVVGELELLYGGENGVVWGEKVLRISHYSPPSERCPPLAVLHTITSSS
TTGNGISFKLEPTKSKSLSPDSPLFLLHSTCLRDNKTAVVSLGREELHLVAMQSKNFGGQ
CPCFWGFKVASGLYNSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKINSES
DPQRASAMLAEVKRYQEDKIFLKQYAENDQVIDNGKVIKSQSEVFPALSDNHQPIVRPLI
RLQDRNIILTRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEM
WRLLDPDSNLINSKELLDRIVCVKSGLRKSLFNVFQDGNCHPKMALVIDDRLKVWDEKDQ
PRVHVVPAFAPYFSPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISEVAYEDE
IKQVPSAPDVSNYLISEDDPSAVNGNKDSLGFDGMADTEVERRLKEAMLASTSVPSQMTN
SDPRIAPALQYPVPPAISQSTIQAPVVPFPAQHLPQVTSVLKASVIQLSPQDTSLQSSPA
REEGEVPESELDPDTRRRLLILQHGQDTRDQVSSEPQFPMGTPLQVSVPPRVQPHGWFPV
EEEMSPRQLNRALPPKEFPLNSESMHINKNRPPHPPFLPKIETSVPSDRVLFETQRLPKE
VIPRDDRMRFSQSQPSFHPMPGEEVSLGRSSSSNRDLDLEPGHYDPYLETPAGALQDIAF
KCGAKVEFKSGLLSSPELQFSVEVWFAGEKIGEGIGRTRREAQRQAAEESLMNLADKYLS
RLKPDLSSTAGDGFRFPNASDNGFVDDMSPFGYQSYLKEDRVSHSFASEPSRVLDPRLEV
LKKSVGSVASLRELCAIEGLGLAFQTQPQLSANPGKTEIYAQVEIDGQVFGKGIGSTWDD
AKAQAAERALVALKSELVQFSHKRQGSPRSLQQGFSNKRLRPEYSRGMQRLPSSGRFPKN
TSAMP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtggtattgtatgaaggagaaagagtggtgggagaactggaattg
ttgtatggtggtgaaaacggtgtcgtatggggagagaaggtattaaggatctctcactat
tcgccaccaagtgagcggtgtccaccactggcagtactacacacaattacttcatcatct
actaccggaaatggaataagcttcaaattggaaccaacaaaatcaaagtcgctgtcccca
gactcgccgctctttcttttgcactccacttgtctcagagataacaagactgcagtagtg
tcacttggaagagaggagcttcatttagttgccatgcagtctaaaaattttggcggacag
tgtccttgcttttggggatttaaggttgcatcagggctttacaattcttgtttaacaatg
ctaaaccttagatgtcttggcattgtatttgatcttgatgagacactcatagttgccaac
acaatgcgttcatttgaggatagaatagaggccttgctacggaaaataaattcagagtca
gatccgcagcgtgcctctgctatgctggctgaggtcaagcgttatcaggaggataagatt
tttttgaagcaatatgccgaaaatgatcaggttattgacaacggaaaggtgatcaaatct
cagtctgaggttttcccagcgttgtctgataatcaccaacctatcgtcagacccctgatt
aggttgcaagatagaaacattattcttactcgtataaatccaatgatccgcgatactagt
gttcttgtgagattgagacctgcttgggaggatctccgaagctatctgactgcaaggggt
cggaagcgctttgaagtttatgtatgcacaatggctgaaagagattatgctttagaaatg
tggaggcttcttgacccagattcaaacttgattaactcaaaagagctcttggatcgtatt
gtctgtgttaaatctggtttgaggaaatctttgttcaatgtattccaagatggaaattgt
catcctaagatggcattggtgattgatgatcgcttgaaagtgtgggatgagaaggatcaa
ccacgagtgcacgttgttcctgcatttgctccatatttttccccgcaagctgaaggcaac
aattctgttcctgtcctttgtgttgccagaaatgtagcctgcaatgtcagaggtggtttt
ttcaaagattttgatgagggcctattacaacgaatatctgaagttgcttatgaagatgaa
attaagcaagttccttctgctccagatgttagcaactatttgatttcagaggatgatcct
tcagctgtaaatgggaataaagattcacttggatttgatggcatggctgatactgaggtt
gaaaggagactaaaggaagcaatgttggcttcaacaagtgttccttctcaaatgacaaat
tcggatccaagaatcgcaccagctctccagtaccccgtcccacctgctatttctcaatcg
acaattcaagcgccagtggtcccttttcctgctcagcatctccctcaagtgacttctgtt
cttaaagcatcagtgattcaattaagtcctcaggatacaagcttgcaaagttctcctgct
agggaagagggcgaggtaccagaatctgaactagatcctgatacaaggaggagactgctt
atattgcaacatggtcaagacacgagagatcaagtatcaagtgaaccacagtttcctatg
gggactccattacaagtgtctgtaccaccgcgggtgcagccacacggttggtttccggtg
gaggaagagatgagccctagacaacttaatcgagccttgcctcccaaggaatttccttta
aattcagagtctatgcatattaacaagaatcggcctcctcatccaccttttcttcccaaa
atagagacctctgtcccatctgatagagttctttttgaaacccagaggctaccaaaagag
gtaatccctagggatgacaggatgagattttctcagtcacaacctagttttcatccaatg
ccaggtgaggaagtctccttgggtcggtcatcttccagcaacagggatcttgaccttgaa
cctggacattatgatccatatttagaaacacctgctggagctttacaggatattgcattc
aagtgtggagcaaaggtggaattcaagtcaggtttgctttcaagtccagaactgcagttt
tctgtggaggtgtggtttgctggagaaaaaattggagaaggaattggccggacgagaagg
gaagcacagcgtcaggctgctgaggaatctcttatgaatctggcagacaaatacttgtca
cgtctcaaacctgatctcagttccacagcaggggatggatttaggtttccaaatgcaagt
gataatgggtttgttgacgacatgagtccttttgggtatcaatcatatctcaaggaggat
cgtgtgtcacattcatttgcatcagagccttccagagtgttggatccaaggctggaggtc
ttgaagaagtcagtgggttcagttgcctcccttagagaactgtgtgcgattgaaggactt
ggtttggcattccaaactcagcctcaactttcagctaatccagggaaaactgaaatatac
gcccaggtggaaatagatggacaagtatttggcaagggaattggttcaacatgggatgat
gctaaagcacaggctgctgaaagggctctagttgctttgaagtcagagctggttcaattt
tctcacaagcgtcagggttctccgagatcattgcagcagggattctccaataaaagattg
agacccgagtattctcggggtatgcagcgactaccatcttctggtagattcccaaagaac
acttctgctatgccatga
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