Nicotiana attenuata (coyote tobacco): 109233138
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Entry
109233138 CDS
T05870
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109233138
Membrane trafficking [BR:
nau04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109233138
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
109233138
NCBI-ProteinID:
XP_019254460
LinkDB
All DBs
Position
10:21719848..21777598
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AA seq
1836 aa
AA seq
DB search
METSSSGYRFRRIPRHSFAGSVNLDPLLDENLEQWPHLNELVQCYRTDWVKDENKYGHYE
SVSPASFQNQIYEGPDTDIETEMHLANARRPKIEDSIDDEIPSTSGTQLSETNFSDLSNA
KISKHFGESPLPTYEPVFDWENERSLIFGQRIPEAHMSQYTSGLKIAVKVLSLSFQAGLV
EPFYGTICLYNRERREKLSEDFIFHILPSEMQEASSSCERRCIFHLDAPSASICLLIQLE
KPATEEGGVSPSVYSRKEPVHLTEREKQKLQVWSRIMPYKESFAWAIIPLFDSNITSVAG
SASPSSPLAPSVSASSSQEGITDPVSKVTADGKLGYSNGNSIVVEVSNLNKVKEGYTEES
LQDPKRKVHKPVKGVLKLEIEKLPASSAEVENTLESGSLAYDSLDHGDHLTDSASMKRPT
NGFFSKSKSFEMKELVRNFSIAQENVENSADDFEAFDFRTTTRNEPFLQLFHCLYAYPLT
VSMSRKRNVFIRVELRKDDTDIRKSPLEAMHPREPGVPLQKWSHTQVAVGARVASYHDEI
KISLPAIWTPLHHLLFTFYHVDLQTKLEAPKPVVIGYASLPLSTHAQFRAEISLPIMKEL
VPHYLQDSAKERLDYLEDGKNIFKLRLRLCSSLYPVSERIRDFFLEYDRHTLRTSPPWGS
ELLEAINSLKNVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVD
EAERNAFLVNFVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWF
FLELIVKSMALEQARSFYHNLPSGEDVPPMQLKEGVFRCVVQLYDCLLTEVHERCKKGLS
LAKHLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQTVLHDCKLTFLQIICDHDL
FVEMPGRDPSDRNYLASILIQEIFLTWDHDDLSMRAKAARILVVVMCKHEFDIRYQKQED
KLYIAQLYFPLVGQILDEMPVFYNLSTIEKREVLIIFLQIVRNLDDDSLVKAWEQSIART
RLFFKLFEECLMHFEHRKPADGMLVGSSSRSVMGDGPASPKYSDILSPAINHYMSEAARQ
EVRGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASALALRESLHPILRQKLE
LWEENLSAAVSLQVLEVSEKFSRTAATKHIATDYGKLDCITSIFMNVFSRNQPLSFWKAL
FPVFNNVFELHGATLMARENDRFLKQIAFQILRLAVFRNDNIRKRAVIGLQLLIRSSFSC
YMQTGRLRVMLTITLSELMSEVQVTQMKPDGTLEESGEARRLRNSLDEMADEAKSSSLLL
ESGLPENALVAVPEGSTENRWSWSEVKVLSDSLLMALDASLEHALLGSVMNVDRYAAAES
FYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVSRNDGVWSK
DHVSALRKICPMVSSEITSEASAAEVEGYGSSKLTVDSAVKYLQLANKLFSQAELFHFCA
SILELVIPVYKSRKAYGQLAKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGEKFGK
LDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGTTLHVIPDSRQVKADELQTGVCYLQIT
AVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVL
QTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcatctagtggatatcggtttcggagaataccacgccactcctttgctggt
tctgtgaatttagatcccctgcttgatgaaaatttggagcagtggccacatttaaacgaa
cttgtgcaatgctatagaaccgactgggtaaaagatgagaacaagtatggtcactatgaa
agcgtcagcccagcttcatttcagaatcagatatatgagggtcctgatactgatattgaa
acagagatgcatcttgcaaatgctaggcgacctaagattgaggattcaattgatgatgaa
atccccagcacttctgggacacaactctctgaaactaatttctctgacctctcgaacgcc
aaaatctctaagcattttggtgaatcccccctaccgacttatgaaccagtttttgactgg
gaaaatgaaaggtcactaatatttgggcaaaggattccagaagctcatatgtcccagtat
acgagtggtctgaagattgccgtgaaagtcctatcattgtcatttcaagctggacttgtt
gagccgttttatggcacaatttgtttatataatagggagcgaagagaaaaactttcagag
gattttattttccatatattgccttccgaaatgcaagaagcaagcagttcctgtgaacgg
cgttgtatttttcatcttgatgctccatcagcatctatttgtctgctaatccaactagaa
aagcctgcaactgaagaaggtggagtgtctccttctgtttattcacgaaaggaaccagtt
catctgacagagagagagaaacagaagctacaagtgtggtcgcggatcatgccttataag
gagtcctttgcctgggccatcattccactctttgatagtaacattacttctgttgctggc
tctgcttctcccagcagtcctcttgctccaagcgtttcagcttcaagttctcaagagggt
atcactgacccagtttcaaaagttacagctgatggaaagcttggttattcaaatgggaac
tctattgtggtcgaagtgtctaacttaaataaagtcaaagaaggatataccgaggaatca
ctccaggatccaaagcgaaaggttcataaaccagtaaaaggtgtcttgaaattggaaatc
gaaaagctgccagctagctctgctgaagttgagaatactttggagagtgggagtctggct
tatgattctcttgatcacggagaccatttgactgattcggcttctatgaaacgccctact
aatggtttcttttctaagtctaaatcctttgagatgaaagagcttgttcggaatttttca
attgctcaggaaaatgtggaaaattctgctgatgattttgaagcttttgacttccgcacg
acgacaagaaatgaacctttcttgcagctctttcactgcttatatgcctaccccttgact
gttagtatgagtcggaaaagaaacgtgtttatacgtgttgaactgagaaaggacgataca
gacattcggaaatcacctctagaggctatgcatccaagggaaccaggtgtaccacttcag
aaatggtcacacacacaagttgctgttggggcaagggtcgccagctaccatgacgagatc
aaaatttctttgcctgctatttggacaccattgcatcaccttttgtttactttctatcat
gttgatcttcaaacaaaacttgaagccccaaagccggtggtaattggatacgcttcactt
ccattgtccacacatgcgcagttcagagctgagatttccttgccaatcatgaaagaatta
gttcctcattatcttcaagatagtgccaaggagaggctggattacttggaagatggcaag
aatatattcaagcttcgtttacgactatgttcatcattgtacccagttagtgaacgcatt
agggattttttccttgagtacgataggcacactcttcggacaagtcccccttggggatct
gagcttcttgaggcaatcaatagcctgaagaatgttgattccacagctttgcttcaattt
ctttatccgatcttaaacatgcttctccatcttattggcaacgggggagaaactcttcag
gttgctgcatttagagcaatggttaacattttaacaagggtgcagcaggagtctgttgat
gaagctgagagaaatgctttcctagtaaactttgttgattatgcttttgatgattttggg
ggtcgtcagccaccagtctatcctggtttgtccacagtgtggggaagtttggctcgcagt
aaggcaaaagggtaccgcgttgggccagtctatgatgatgtcctggcaatggcttggttt
tttcttgagctgattgtcaagtcaatggcactggagcaggctcgatccttctatcacaat
cttccatcgggtgaagatgtcccgccaatgcagttgaaagaaggtgtttttagatgtgtt
gttcaattgtacgactgccttctaacagaagttcatgaacgctgcaagaaaggtctaagc
ttggccaagcatttaaacagtagtttggctttcttttgttatgatcttttatccatcatc
gagcctcggcaggtttttgaactggtatccttgtacctcgataaattctctggagtgtgt
cagacggtgctgcatgactgcaagcttacttttctacaaattatatgcgatcacgatctt
tttgttgaaatgcccggacgagatccttctgataggaattatcttgcatctatcttaatt
caagagattttccttacatgggatcatgatgacttatcaatgagggcaaaagctgcaaga
atcctggtggtcgtcatgtgtaagcacgagtttgatattcgttaccaaaagcaagaggat
aaattatatattgctcaattatattttccccttgttggccagatcctagatgagatgcct
gtcttctacaatctgagtacaattgaaaaacgtgaagtcctgattatctttctgcaaata
gtacgcaacttggatgatgactcacttgttaaagcttgggagcagagcattgcacggacc
agattatttttcaaactctttgaagagtgcttgatgcattttgagcataggaaacctgct
gatggcatgcttgttggtagtagttctcgtagtgtgatgggggatggacctgcatcccca
aaatattctgacattctttcacctgcaataaatcattatatgtctgaagcagcgcggcaa
gaagtcagaggaactccggataatggttatttgtggcagagagtcaactcccaattaagc
tcacctagtcagccatattctttgagagaagcgttggctcaagcccaatcttccagaatt
ggagcatcagcgctagcattaagggaatctttgcacccaatcttaaggcaaaagctggaa
ctttgggaagaaaacctgagtgctgctgttagtcttcaagttttagaagtttccgagaag
ttctcacggactgctgcaacgaagcacattgctactgattatggaaaacttgactgtatc
acatctatatttatgaacgtgttctcacgtaatcaaccactctccttctggaaagctctc
tttcctgtcttcaacaatgtctttgaacttcatggagctacactgatggcaagagaaaat
gatcgcttcttaaagcaaattgctttccaaattcttcgacttgcagtttttcggaatgac
aatatcaggaaaagggctgtaattggcctgcagttacttattcggagctcgttttcttgt
tatatgcagacgggaagattaagagtcatgctaaccattacattgtcagagttaatgtct
gaagttcaagtaacacaaatgaaacctgatggcacactagaagaaagtggtgaagctcgt
cgtcttcgaaattctttggatgaaatggcagatgaagctaagagttcctccttattatta
gagtctgggctccctgaaaatgcactggttgctgttccagaaggatcgacagaaaaccgc
tggtcctggtctgaggttaaagttctttcggacagtcttcttatggctcttgatgccagc
ctggaacatgcacttttgggctctgttatgaatgttgataggtatgcagctgcagagagc
ttttataaactagcaatggcatttgctcctgtaccagatcttcacataatgtggttactg
catctttgtgatgctcatcaggaaatgcagtcttgggctgaagctgctcagtgcgctgtt
gctgttgctggtgtagtgatgcaggcccttgtgagtagaaatgatggtgtctggagcaag
gatcatgtgagtgcattgcgcaaaatatgccccatggtcagcagtgagatcacttctgag
gcctcagcagctgaggtggagggatatggttcttcaaaactcacagttgactcggctgta
aagtatttacagcttgcaaataagcttttctctcaagctgagttattccatttctgtgca
agcattctagaacttgtaattccagtatataaaagcagaaaggcgtatggacagcttgcg
aaatgccacacaatgcttactaatatctatgaatccatccttgagcaggaatcaagccct
atacctttcacagatgccacatattatagagtaggattttacggtgagaagtttgggaag
ctggataggaaagaatatgtttatagagagcctcgtgatgtgcgattaggtgatataatg
gagaaattgagccatatctacgagtcgagaatggacggaactacattacatgtaattcct
gattctagacaagtcaaagcagatgagttgcagactggagtctgctacctgcaaataact
gcagtcgatccagttatggaggatgaagatttaggaagcagaagggaaagaatattctct
ctctctacgggaagtgtccgtgctcgagtctttgatcggtttttgtttgatacccctttt
actaaaaatggaaagacccaaggaggcttggaagatcaatggaagcggcgaacagttctg
caaactgagggatcttttccagcgctagtgaaccgactcttggttatcaaatcagaatct
cttgagttctccccggttgagaacgctattggaatgattgaaactaggacagctgcatta
aggaacgaacttgaagagcctcgaagttcagaaggcgatcaacttccccgtttgcagagc
ttacaaaggattcttcaaggttctgttgcagttcaagttaacagtggagtcctcagcgtc
tgcacagctttcctttctggtgaacctgcaactaggttacgttcgcaggagctacaacaa
cttattgctgctcttcttgaatttatggctgtgtgcaaacgtgctattcgggtacacttt
aggttgatcggggaagaagatcaggattttcatactcagcttgtaaatgggttccagtct
ctcactgcagaactatcacattatattcctgcaattctttcagagctgtag
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integrated database retrieval system
