Nicotiana attenuata (coyote tobacco): 109233214
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Entry
109233214 CDS
T05870
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109233214
04121 Ubiquitin system [BR:
nau04121
]
109233214
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109233214
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109233214
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109233214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
DUF7385
HypA
Rad50_zn_hook
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
109233214
NCBI-ProteinID:
XP_019254545
UniProt:
A0A1J6HZW3
LinkDB
All DBs
Position
10:complement(29116597..29118385)
Genome browser
AA seq
365 aa
AA seq
DB search
MSMSSNYWCYRCNRFITVRNQDSITCPNCNSGFVEELVETPNRSPLSASRRRRFPAVASD
SGPTLQRSRRNGGDRSPFNPVIVLRSPSRGGGTGGGDGGGGAAGAFELYYGDGSGSGLRP
LPASMSEFLLGSGFDRLLDQLAQIDVGRIENPPASKAAIESMPTIEIVPSHVDVESHCAV
CMESFELGTEAREMPCKHLYHSDCILPWLSLRNSCPVCRQELPTESGGDSNEQNRNVGHD
DEAVGLTIWRLPGGGFAVGRFGRMVGGERELPVVYTEMDGGFNSNGVPRRISWGSGGGRE
SQQNGGLRRLFCSFFSCFGGAASSSSETSGSDLRTNRNTSGSLSSVFISTSRRRRDWDFE
TNTEA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgtcgaattattggtgctatagatgcaatagatttattacagtacggaac
caagattcaatcacatgccccaactgcaacagtgggttcgtcgaagaactggtcgagact
cccaacagatccccactgtccgcttctcgacggcgtcgtttccctgcagtggcttctgat
tcaggtccaactcttcagaggagcaggagaaatggtggtgataggtcaccctttaaccct
gtcatcgtcctcagaagtccttcccgtggcggtggtactggcggtggtgatggtggtgga
ggggctgcaggagcatttgagctgtattacggagatggatctgggtcgggtttgaggccc
ttgcctgcaagtatgtcggagtttctacttggatcgggcttcgataggcttttggatcag
ttagcacagattgatgttggaagaattgaaaatccaccagcttcgaaagctgcaatcgag
tcaatgccaaccattgagattgtcccttcacatgtggatgtagaatctcactgtgctgtt
tgtatggagtccttcgagctgggaactgaggctcgcgaaatgccctgtaagcatttatat
cattccgattgtattctaccatggctgtcactgcggaattcttgccctgtttgtagacag
gaattgcccaccgagagtggtggagattcaaatgagcaaaatagaaatgtaggacatgat
gatgaagctgttggtttaacaatatggagattgccaggaggtggatttgcggtcgggagg
tttgggaggatggtgggtggggagcgagagctgcctgttgtatatacagagatggatgga
gggttcaatagcaatggggttccgagaaggatttcatggggttctggaggagggagagag
tcgcagcaaaatgggggtttgaggagactattttgcagtttcttttcatgttttgggggg
gctgcttcatccagctccgagacctctggttcagatttgaggacaaatcgtaacacaagt
ggttcattgtcatctgttttcatctctacatcaagaaggcgtagggactgggactttgaa
actaacactgaagcttga
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integrated database retrieval system
