Nicotiana attenuata (coyote tobacco): 109233217
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Entry
109233217 CDS
T05870
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109233217
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109233217
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
OppC_N
Motif
Other DBs
NCBI-GeneID:
109233217
NCBI-ProteinID:
XP_019254547
UniProt:
A0A1J6IJH4
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Position
10:complement(29419411..29424073)
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AA seq
402 aa
AA seq
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MGMPIIFLLLVALFAPLFTFSTPVPDPEVIVQEVNDKIFNSSRRNLGYLSCGTGNPIDDC
WRCDPNWEKNRQRLADCAIGFGKQAIGGRDGKIYIVTDTSDDPVNPKPGTLRYGAIQNEP
LWIIFGRDMVIKLKEELMLNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ
GGNAYVRDSPEHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIRGSTAITISN
NYMIHHNKVMLLGHSDSFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAVGGSASPTINSQGNRFLAPNDIFNKEVTKHEDAPESEWKNWNWRSEGDLMLNGAFFT
RSGAGASKSYAKASSLSARPSTLVSSITVNAGALGCKKGKRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgccaattatcttccttctccttgttgctctttttgctcctctcttcacattc
tcaactcctgttcctgaccctgaagttatagtccaagaagttaatgacaaaattttcaat
tcatcaagaaggaacttaggctatttatcatgtggaacaggcaaccctattgatgattgc
tggagatgtgatccaaattgggaaaaaaacaggcaaagattagctgattgtgccattgga
tttggcaaacaagccattggtggaagagatggtaaaatttacatagtgactgatactagt
gatgatcctgtaaatccaaagccaggaactttaagatatggtgcaattcaaaatgaacca
ctttggattatatttggtagagatatggttattaagctaaaagaagaattaatgttgaat
tcattcaagactattgatggtagaggagctagtgtacatattgctggtggtccatgtatt
actatacaatatgttacaaatattattatacatggattaaatattcatgattgtaaacaa
ggaggaaatgcttatgttagagattcaccagagcattatggttggaggacattatcagat
ggagatggagtttctatatttggaggaagccatgtttgggttgatcattgctctttgtca
aattgtagagatggcttgattgatgcaattcgtggatctactgccattactatttccaat
aattacatgatacatcataacaaggtaatgcttttgggacatagtgattcattcactagg
gacaagaacatgcaagttaccattgcttttaaccattttggagaagggcttgtacagaga
atgccaagatgtagacatggatatttccatgtggtgaacaatgactacacccattgggag
atgtatgcagttggaggaagtgcttctccaactatcaacagtcaaggcaatagatttctt
gctcctaatgatatcttcaacaaggaggtgacaaaacatgaagatgcaccagaaagtgaa
tggaaaaattggaactggagatctgaaggagatttaatgcttaatggagctttctttact
aggtctggtgctggagcttctaaaagttatgctaaagcttcaagtttaagtgcaaggcca
tctactttagttagctctattacagtcaatgctggtgcacttggctgcaagaagggcaaa
agatgctga
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