Nicotiana attenuata (coyote tobacco): 109233335
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Entry
109233335 CDS
T05870
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
nau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109233335
03015 mRNA surveillance pathway
109233335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109233335
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109233335
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109233335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Thi4
Motif
Other DBs
NCBI-GeneID:
109233335
NCBI-ProteinID:
XP_019254720
UniProt:
A0A1J6IC04
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Position
10:39849563..39858649
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AA seq
498 aa
AA seq
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MADSSNTSSSTAATTTGNPPEIRSWADEADEIDQAEKSSAANENDSAEPQIGSLQIDESK
RVINSTLDDPEDSRIEAVTSGDTMYKSAKRFEDLNLSPELLKGLYVEMKFERPSKIQEIS
LPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELAIQNMEVL
LKMGKFTGITSELAIPADAANYIPVSKRPPVSAQVVIGTPGTINKWVTARKLGMSCMKIL
VFDEADHMLAETGFQDDSIRIMKAIVKASADSQVLLFSATFGENVKAFVTKIVRDLFVKD
YNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKVGQTIIFVRTKNGASML
HKSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQSQVNLVVNYD
LPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCNDRDDMLMSKIENHFNSQVTEIA
SWRSDEDFENALKKAGLL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagctcaaatacttccagtagcaccgccgcaactacgacgggaaacccgccg
gaaatcagaagctgggcagacgaagccgacgagatcgatcaagccgagaaatcttcagcc
gctaatgaaaacgatagcgccgagcctcaaatcggatctctacaaatcgatgagtccaaa
agagtcataaattccactctcgatgatccagaagattccagaatagaagccgttacatct
ggcgacacgatgtataaatcagctaagagatttgaggatttgaacttatctccggagtta
ttgaaaggattatatgtagagatgaagtttgagcgacctagcaaaattcaggaaattagt
ttgcccatgattcttacgccgccctacaagaatctaattgctcaggctcataatggttct
ggtaaaactacttgctttgtgcttgggatgttgagtcgggttgaccctaagcttgctgcc
cctcaggctctctgtatctgcccaaccagagaattagcaattcagaatatggaggttctg
ttgaagatggggaagttcactggtataacatcagagttagctatcccagcagatgcagcc
aattacataccagtttcaaagcggcccccggtttcagcacaagtagtaattggcacaccc
ggaactataaataagtgggtgacagcaaggaaattgggcatgagttgcatgaaaattctc
gtatttgatgaagcggaccacatgttggctgagactggttttcaggatgattccataaga
ataatgaaggcaattgtcaaagccagtgctgacagccaggtgcttctgttttctgcaact
tttggggaaaatgtaaaagcctttgtgacaaaaattgttagagatcttttcgtgaaagat
tacaaccagatgtttgtgaagaaagaagaactttcgctggattcagtgaagcagtataaa
gtgcagtgtccggatgaactttcaaaggtcatggtgattaaagacaaaatacttgaacta
ggacagaaggtgggtcagacaattatatttgttcgtacaaaaaacggcgcgagtatgttg
cataaatcattggttgactatggatatgaagtgacaacaattcaaggtgctttgaagcaa
gaagatagagacaaaataatcaaggagttcaaagaaggattgacacaagttcttatatca
actgatcttcttgctcgtggatttgaccaatctcaggttaatttggtggttaattatgat
ctcccggtgagacatgagagtccatcagagccagatcatgaggtatacttgcatcggatt
ggtagagctgggcgttttggccgcaaaggtgccatattcaacttgctctgcaatgaccgg
gacgacatgctaatgtcaaagattgagaatcatttcaacagtcaagtgacggagatcgcc
tcatggaggagcgatgaagattttgagaatgctctgaagaaagctggcttgctctaa
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