Nicotiana attenuata (coyote tobacco): 109234031
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Entry
109234031 CDS
T05870
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109234031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109234031
03110 Chaperones and folding catalysts [BR:
nau03110
]
109234031
03029 Mitochondrial biogenesis [BR:
nau03029
]
109234031
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109234031
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109234031
Messenger RNA biogenesis [BR:
nau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109234031
Chaperones and folding catalysts [BR:
nau03110
]
Heat shock proteins
HSP60 / Chaperonin
109234031
Mitochondrial biogenesis [BR:
nau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109234031
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109234031
Exosomal proteins of other body fluids (saliva and urine)
109234031
Exosomal proteins of breast cancer cells
109234031
Exosomal proteins of colorectal cancer cells
109234031
Exosomal proteins of bladder cancer cells
109234031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109234031
NCBI-ProteinID:
XP_019255395
UniProt:
A0A1J6I7Q4
LinkDB
All DBs
Position
11:complement(2228412..2233039)
Genome browser
AA seq
589 aa
AA seq
DB search
MASANAISTASIIPSPSKQGALKNRRVNQLQGQKFSNRNAKNNRFVVKACAKEIAFDQKS
RSALQAGIDKLADAVGLTLGPRGRNVVLDEYGTPKVVNDGVTIARAIELPDAMENAGAAL
IREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVLGLIEELEK
MARPVKGRDDIKAIASISAGNDESIGTMIADAIDKVGPDGVLSIESSSSFETTVHVEEGM
EIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAED
VTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQATDLGLLIEGTP
VEALGIARKVTITKDSTTIIADAASKDEIQARIAQLKKELSETDSVYDSEKLAERIAKLS
GGVAVIKVGAATEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKL
EDADEKLGADIIQRALVAPASLIAQNAGIEGEVVVEKVREAEWEMGYNAMTDKYENLVDA
GVIDPAKVTRCALQNSASVAGMVLTTQAIVVEKAKPKAAAPAAPQGLSV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagctaatgctatctccactgcctctatcattccttctccttctaaacagggg
gcattgaagaacaggagggtcaaccaattgcagggacagaaattcagcaacagaaatgca
aagaacaaccggtttgtagtcaaggcctgtgctaaagaaattgcctttgaccaaaaatct
aggagtgcccttcaggctggtatcgataagcttgctgatgctgtcggcctcactcttggt
cctagggggaggaatgtagtgttggatgaatatggcaccccaaaggtggttaatgacggt
gttacaattgctcgtgctatagagctacctgatgctatggaaaatgctggtgctgccctt
atcagggaggttgcaagcaaaacgaacgattcagctggtgatggaaccacgactgcatct
gttcttgcccgcgaaatcattaagcttggtctgttaagtgttacatctggtgcaaaccca
gtgtctttgaagaagggcattgacaaaactgtattgggtttgattgaagagctagaaaag
atggctagacctgttaaaggtcgtgatgacatcaaagctattgcttcaatctctgctgga
aatgatgaaagcattggcaccatgattgcggatgcaattgacaaagtcggtccagatggt
gtgttgtccattgagtcatcctcctcctttgagacaactgttcatgttgaagaaggaatg
gagatcgatagaggatatatttccccacaatttgtcaccaaccctgaaaagttaattgtt
gagtttgagaatgctagagtcttggttacggatcagaagatctcggctatcaaggatatt
atccccctattagaaaagacaactcaattgcgctcccctctgctcattattgctgaagat
gtcactggggaagctttggctactcttgttgtgaacaagctgcggggtatactgaacgtt
gccgccatcaaagctcctggttttggtgaaaggagaaaggctcttctgcaagatattgcc
attgtgacaggagctgagtaccaagcaactgacctgggcctgctcattgagggtacccca
gttgaagcacttggaattgccagaaaggttaccattaccaaggactcaacaaccatcatt
gctgatgcagcatcgaaggacgagatacaggctaggattgctcagctcaaaaaggagttg
tccgagacagactcggtttatgactccgagaaacttgctgagagaatcgccaagttgtcc
gggggtgttgctgtcatcaaggttggagctgcaacagaggctgagcttgaggaccgcaag
cttcgcattgaggatgcaaagaatgcaacttttgctgcaatcgaagagggaatagtacct
ggtggtggtgctgcttttgttcatctatcaacatatgtccctgccattaaggacaagctt
gaagatgcagatgaaaagttgggtgctgacatcattcaaagggcattagtagccccagca
tcgttgatagcccaaaatgctggaattgaaggggaagtagtagtggagaaggtaagggaa
gctgaatgggagatgggttataacgcgatgacagacaaatacgagaatcttgttgacgct
ggagtcatcgatccagccaaggtgacaagatgtgcgttgcagaattcagcatcagttgca
ggaatggtacttacaacacaagccatcgtggtcgagaaggcaaagcctaaggcagctgca
cctgctgctccgcaagggctctcagtgtga
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