Nicotiana attenuata (coyote tobacco): 109234096
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Entry
109234096 CDS
T05870
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109234096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109234096
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109234096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
109234096
NCBI-ProteinID:
XP_019255487
UniProt:
A0A1J6HUX8
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Position
11:8952612..8967057
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AA seq
801 aa
AA seq
DB search
MITGGRNLVSSQPAFSNDAKKLLVCTGNTVSVFSTSTGLQIAELEGHKALVTSVVVVPST
TPAGKILCYCWTASHDGTIKYWDFSVPELMRSINAQFPIYSMVIPGLLSQPAESSEKPSD
LFAYVSTRAFKEQQGEGNALCWQIRKCNLTKSTLVGGVTLAESQEAQSITLSSSGRYMGL
CDKRKLRIWEIPAKDSDQAVLQKIRLHHTKTLSTLAFHPTERIVAAGDVTGRILIWRGVG
EQNLPSGNKQRNEGLVKDVEERPGVRGNDDADSCTTRHWHSAEVKVLFFSSDGAYVYSGG
KEGVLVVWQLDTGKQKFLPRIGSPLLYFTISSDPSLSSISCADNRIHLLKMPSMEVLRSI
QGIKLRSTLLDSFDGSSEGIVFNSATGLVAIRSENYCVQFYSLFDDREVSEVQVCERSHQ
PADEVTVVVNLVALSPEGSIMITVETRLAEEGIGGLVCLKFWSCSSSNKDFSLSTVVYEP
HRDSGISSIAFHPSRNIAVSTSWGADFKVWVGSQEMQQKERMQNAGWTCHSVGSYKKKPM
TAAAFSGDGSVLAVAAERVITLWDPEKNILVATVGESLEPISSLAFIGKSEYIVTTSQGS
NAQVSVWSMSKLSVVWSYKLKIEAVTCAIDDSLFAILALGPKSFGSTDGVILLFNVGDLV
PAAIWLVRKAKGASLAFIRGSPNSEGGVTDGKSVQLLLAYLNSDHEYALFDPLNSHTHIH
KISRGSLTDLEETGKFGYASIYGDLPEFSLEKKQAPLITSVPSERHWETLFSGPSHNLPP
LTKLCSLFLESLLEKRSSAVE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgattacgggtggaagaaacttggtttcttcacaacctgcattttcaaacgatgcaaag
aaacttctcgtatgcacaggaaacaccgtttctgttttcagcacctccactggcttacag
attgctgaattggaaggtcataaggcattagtaacttcggtggttgtagtaccgtctact
actccagcaggcaaaatattgtgctactgttggacagcgtcacatgatggtaccatcaaa
tattgggacttttcagtgccggagctgatgagaagtattaatgcccagttccccatttac
tctatggtgattccaggtttattatcccaacctgcagagagtagcgaaaagccttctgat
ctttttgcatatgtatctaccagagccttcaaagaacagcaaggagagggtaatgcttta
tgctggcagataaggaagtgtaacttaaccaagtctactttggttggtggagtgactttg
gcggagagtcaagaggcacaatctataacacttagctcctctggaagatacatgggctta
tgtgacaagcgcaagcttcgcatatgggaaataccagcaaaagattctgatcaagcagtg
cttcagaaaatcaggttacatcatacgaaaaccttgagcactctagcttttcatccaaca
gagaggattgttgcagctggagatgtaacaggaaggatcttaatatggaggggtgttggg
gagcagaatttaccatctggtaataaacagagaaatgaaggactagtgaaggatgtggag
gaaaggcctggagttaggggaaacgatgatgctgattcttgtaccacaaggcattggcat
tctgcagaagtgaaagttctctttttttcttctgatggtgcctatgtgtactcaggtggg
aaggaaggagttcttgtggtttggcagttagacaccgggaagcagaaatttctcccgcga
ataggatccccccttttgtattttaccatctcatctgatccttctctgtcctctatatct
tgtgcagataaccgaatccaccttctcaaaatgccttcgatggaggtattgagatccatt
caaggaatcaagcttcgtagcacactcctggactcgttcgatggctcatctgaaggaatt
gtttttaactctgctaccggactagttgccatacgttcagaaaattactgtgtccagttt
tatagcttgtttgatgaccgtgaggtttctgaggttcaagtttgtgaaagaagccaccaa
ccagctgatgaagtcacggtggtagtgaatttggtggccctttctccagagggttctatc
atgattactgtagaaaccaggctcgctgaagaaggaataggaggtcttgtatgtctgaag
ttctggtcatgcagctcttcaaataaagacttcagcttatccactgttgtctatgagccc
cacagagattctggtatttcatccatcgctttccacccttcgcgtaacatagctgttagt
acttcatggggtgctgatttcaaggtttgggtaggcagtcaggagatgcaacaaaaagag
cggatgcaaaatgctggatggacatgccattctgttggttcttacaaaaaaaagccaatg
acagctgctgccttttctggagatggttctgtgctggctgtagctgcagaacgagttatt
acattgtgggatccagagaagaatattcttgtggcgacagttggggagagtcttgagccg
atctcttccttagcatttattgggaagtcagagtatattgtaaccacatcacaaggttct
aatgcacaagtatcagtttggagcatgtcaaagctgtctgtagtatggtcttacaagctt
aaaatagaagctgtaacttgtgcgatcgatgattctttatttgccatcctggcccttggt
ccaaagtcatttggatctacagatggggtgatcctattattcaatgttggagatcttgtt
cccgcagcaatctggcttgtaagaaaggcaaaaggtgcttcacttgcttttattcgcgga
agtcctaattcggagggtggtgttactgatggcaaatcagtgcagttgctgttagcttac
ctaaacagtgatcatgaatatgctctttttgatccactcaacagtcacacccacatacat
aagattagccgaggaagtctcactgatcttgaggaaacaggaaagtttggttatgcatct
atctacggggacctaccagaatttagcttagagaaaaaacaagctccactaatcacatca
gtgccatcagaaaggcattgggagactctatttagtggaccatctcacaatcttcctcct
cttactaaattgtgttcgctatttctcgaatcattattggagaagaggagtagtgcagtt
gaatga
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