Nicotiana attenuata (coyote tobacco): 109234228
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Entry
109234228 CDS
T05870
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109234228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109234228
03036 Chromosome and associated proteins [BR:
nau03036
]
109234228
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109234228
Coactivators
SAGA/TFTC/STAGA complex
109234228
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109234228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Serum_albumin
Gln-synt_C-ter
Motif
Other DBs
NCBI-GeneID:
109234228
NCBI-ProteinID:
XP_019255663
LinkDB
All DBs
Position
11:complement(21662137..21682041)
Genome browser
AA seq
858 aa
AA seq
DB search
MQQKEGDSSDLELKQHGIDAPTQQHEDDSSQELNSLRLQHIHAKDAYQLPRAEQNTLHAF
EVLNLKRSEKNPENLDSRHLNLQGLSNQQSMQSFPTGTSGQQLMAAKTSYQPKSATDLSS
QPAIDVVNQGKQVPFSILIPHIQRQLDKDRAMHLQTLYLKLRKNEISKEGFIRHMRSIIG
EQMLKMAVYKFQSQAARNDQAVPQSQASPQQHQQNRTDDSSNLAGDSNAKKLHEVENQAD
LHGTPGSQISSSSLFAVKQERDCSAFPVKGLNKQQQQHLHFSQASFPKFANIGDTYSPYS
VTNVSSSMGTPVKQPSNDIQIRQIPAYPNRNATPLRASTHAVNMINAPKLERQNSFGEPK
RIPGGSLSHVSNTSTMQQSSLQWSRSTNKEQKILLSTPMTNLKPEPIDHLHDQGHESQLA
SFTSVQVEQGNSSSVSSKDEAFKVQTSRMGISTTTSIKPSNLLSLSVSSQMDTITLLNSR
TPSVISPIGPANNGKIPLKMPTIGQKKPLVTQGFSPPPSGKKQKVSGAFSDQSIEQLNDV
TAVSGVNLKEEEEQLFSGPKEDSRLSEASHQAVREEEERLILQKIPLQKKLTGIMAKCGL
KNMSSDVERCLSLCVEERMLGLMSSLIRLSKQDLCQNYEMEYHLFLQRVNIEKSRHRTIV
TSDVGQQIMLMNRKVREEWEKKQAEAEKLQVANEPEDDIGDDGDKEKDAGCIRSMKGNKE
EDDKLRTTAANVAARAAVGGDDMMSKWQLMAEQARQKREGALDVVSHSQPGKALSTPTRN
LRDNQEAKNRTPITLGAVRRVGKSQVALHARVPRNITVKDVIAVLEREAQMFKSTLIYRF
HEKMRSDAPAELVNNSAY
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaaaggagggagattcatctgatttggaactaaagcagcatggtatagatgct
cctactcaacaacacgaagatgattcctcacaggagcttaattcccttcgtttgcagcat
atacatgccaaagatgcttatcaactaccgagggctgaacaaaacacacttcacgccttt
gaggtgttgaatttgaagagatctgaaaagaatcctgaaaatttagattcccggcatcta
aacttgcagggattgagtaatcaacaatctatgcagtcatttccaacagggactagcggt
cagcaattgatggcagcaaagacaagttatcaaccaaaatctgcaactgatttgagtagc
caaccagcaatcgatgtagttaaccagggcaaacaagtgcctttttccatccttatccct
cacatacaacgccaactagacaaagacagggcgatgcatcttcagactctctaccttaaa
ctcaggaaaaatgaaatctctaaggaaggttttatacgacacatgagaagtataataggt
gagcagatgctcaaaatggctgtatacaaattccaatctcaggcagctagaaatgatcag
gctgtacctcagtctcaggcttcaccacagcaacaccagcaaaatcgaactgatgattca
agcaacttggcaggtgatagtaatgctaaaaaattgcatgaggtggaaaaccaagcagat
ttgcatggaacaccaggaagccaaatttcttcttctagtttgtttgctgtaaaacaagaa
agagattgttcagcattcccagtaaagggtcttaataagcaacaacagcagcatttgcac
ttttcacaggcatcttttcccaagtttgcaaatattggggacacctatagtccatattct
gtaactaatgttagttcatctatggggacaccagtcaaacagccatctaatgatatacag
ataaggcaaattccggcttatccaaatagaaatgcaactccattaagagcctcaacacat
gccgtgaatatgataaatgcacctaagcttgaaagacaaaattcatttggtgaacccaaa
agaataccaggtggaagtctttctcatgtgtcaaatacatcaacaatgcaacagagttca
cttcaatggtcacggtccaccaataaagagcagaaaattcttctttcgacaccaatgacc
aatctaaagcctgaaccaattgatcatttgcatgaccaggggcatgaatcgcagttggca
tccttcacatcagttcaagtagaacaaggaaattccagctcagtgagttcaaaggatgaa
gcttttaaagtgcagacgtctagaatgggtatctcaacaaccactagcatcaaaccttca
aatttactctccctttcagtgtcatctcaaatggacactattacattgttgaattctaga
acaccttctgtgatatctcccattgggcccgcaaacaatggaaagatacccttgaaaatg
cctactatcgggcagaagaagcctctcgttacgcaaggtttctctcctccaccttcagga
aagaagcaaaaggtgtctggagccttttcagatcagagcattgaacaacttaatgatgtt
acggctgttagtggagttaatctaaaggaggaggaagaacaactattttctgggcccaag
gaagacagtcgactttctgaagcatctcatcaagctgtgcgagaagaagaggaaaggctg
attctgcagaaaattccgcttcaaaagaaattgactggaataatggcaaaatgtggttta
aagaatatgagcagtgatgtcgaaagatgcttatcattgtgtgtggaggaaaggatgctt
ggacttatgagcagtctcatcagactatcgaaacaggatttatgccagaactatgagatg
gagtaccatttatttttgcagagggtcaatattgagaagtcaagacatagaacaattgtc
acctcagatgttggtcaacaaataatgttaatgaaccggaaagttcgggaagaatgggaa
aagaagcaggcagaagcagaaaaattacaagtggcaaatgaaccagaggatgatattgga
gatgatggtgataaggagaaggatgcaggttgcataaggtcaatgaagggaaacaaggaa
gaggatgacaagttgcggacaacagctgcaaatgttgctgctcgagctgcagttggagga
gatgatatgatgtcgaagtggcaattaatggctgaacaggccaggcagaagcgagaaggg
gcactcgacgtggtgtctcattcacagcctggtaaagccttatcaactcccacaagaaat
ctgagagacaatcaagaagctaagaacagaacccctattacacttggtgctgttagaaga
gttggcaaaagtcaagttgcattacacgccagggttcctcgcaatattactgtcaaggat
gtgatagccgtccttgaaagagaagctcaaatgttcaagtctacattgatataccgcttc
catgaaaaaatgcggtctgatgctccagctgaattagttaacaatagcgcatattaa
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