Nicotiana attenuata (coyote tobacco): 109234233
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Entry
109234233 CDS
T05870
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109234233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nau04040
]
109234233
Ion channels [BR:
nau04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109234233
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
109234233
NCBI-ProteinID:
XP_019255671
UniProt:
A0A1J6HX03
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Position
11:23474973..23484169
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AA seq
732 aa
AA seq
DB search
MFDCGSKSQYLGGQREKFVRLDDLDSRLSSPSASLATNKCGFNIDGRKRSGHATNSPSRS
FKRGMKKGSEGLKSILGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVVSCILAVS
VDPLFFYLPVFDNKSNCLQIDRKLAVIATTLRTVIDAFYLIHMALQFRTAYIAPSSRVFG
RGELVIDPAQIAKRYLRFYFIIDFLAVIPLPQIVVWRFLQSSTGSDVLATKQALLYIILL
QYIPRFVRVIPLTSELKRTTGVFAETAWAGAASYLLLYMLASHIVGSFWYLLSVERYDTC
WQQACTHNATCNTDFLYCGNQYMTGYNSWSSISDKVLNDACPTNSDDSPFDFGIFDQALS
SGIIYSMKFVSKYCYCLWWGLQNLSTLGQGLQTSTYPGESIFSIGLAILGLILFALLIGN
MQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWQETRGVDEENIVQ
SLPKDLRRDIKRHLCLALVKRVPLFENMDERLLDAICERLKPCLYIENTYIVREGDPVDE
MLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAL
TEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYTKRKLM
ELQRKEEEEAEALAAASGNSGGATYSIRATFLASRFAANALRGVHRNRNLKSARELVKLQ
KPPEPDFSADAD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgcggttccaagtcccaatatctggggggacagcgggagaagtttgtaagg
ttggatgacttggattccagactatcctctccttccgcatcactagcaacaaataaatgc
ggcttcaacatcgacggtagaaaacgttcgggccatgcgactaacagcccgtcaaggtct
tttaagcgaggaatgaaaaaaggatctgaaggacttaaatcaatactcggctttggtgtc
tctcgggctgtatttcctgaagatttgaaagtttcagagaagaagatttttgaccctcaa
gataaatttcttctcttatggaataagctgtttgttgtatcatgtattctagccgtgtcg
gtggatccactgtttttctaccttccagtttttgataataagtcaaattgccttcagatt
gacaggaagctcgctgtcatagccactaccctacgtacagtgattgatgctttctatctt
attcacatggctcttcagtttcgcacggcttatattgcaccgtcatctcgagtttttgga
cggggtgaacttgtgatagatcctgcacagattgctaaaagatacttgcggttctatttt
atcatcgattttcttgctgtgatccccttgcctcagattgtggtgtggagattcctgcag
agctcaacaggttctgatgtcctagctacgaagcaagctttgctttacatcattttgctt
cagtacatccccagattcgtcagagttatacccttaacttcggaattgaaaagaactact
ggtgtctttgctgaaaccgcatgggctggtgctgcgtcctatttgctgttgtacatgctt
gctagtcatatagttgggtcattttggtacttgctatctgtggaacgctacgatacatgc
tggcagcaagcttgtacacacaatgcaacatgcaacactgatttcttgtattgtggcaat
cagtacatgacgggttataatagttggagcagcataagtgacaaggttttaaacgatgct
tgccctacaaatagtgacgactcaccatttgattttgggatctttgatcaggctttgtca
tctggcattatttactccatgaaattcgtgtctaagtattgttattgtctatggtggggg
ctgcagaacttgagtacccttggacagggacttcagactagcacataccccggggaatca
atattctctataggattggctatacttgggctcattctctttgcattattgatcggtaac
atgcagacgtatctacaatctcttactattcgactcgaggagatgagagttaaaaggcgt
gactcagaacagtggatgcatcatcgcttgctcccacaagatctccgagaacgggttagg
cgctatgatcagtacaagtggcaggaaacacgaggagtggatgaagagaatatagtccag
agtttgcccaaggatcttaggagggatatcaaacgtcatctttgtcttgctctagtgaag
agggtacctctatttgagaatatggatgaaagattgctcgatgctatttgtgagcgtcta
aaaccctgtttgtatatcgagaatacttacatcgttcgagaaggagatccagtggatgag
atgcttttcatcatacgaggtcggcttgagagtgtgacaactgatggtgggagaagtggt
ttcttcaaccgcagtttgttaaaagaaggcgacttttgtggagaggaacttctaacatgg
gcactagacccaaaatccggttctaacctcccgtcttcaactcgtacagtgaaagctctg
acggaagtggaggctttcgctctaacagcagacgagttgaaattcgttgccagtcagttt
agaaggcttcacagtagacaggttcagcacacgttccgattctactcacagcaatggagg
acttgggctgctattttcattcaagcagcatggaggcggtataccaagaggaaacttatg
gaactccaacgaaaggaagaagaagaagccgaggcattggctgcagctagcggcaattct
ggtggcgccacttacagtatccgagcaacgttcttggcatcgagatttgcagcaaatgct
ctccgaggtgttcataggaatcgaaatctcaagagtgctagggagttggtgaagctgcag
aagcctccagagccagattttagtgcagatgcagattga
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