Nicotiana attenuata (coyote tobacco): 109234241
Help
Entry
109234241 CDS
T05870
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04016
MAPK signaling pathway - plant
nau04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
109234241
04075 Plant hormone signal transduction
109234241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109234241
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
109234241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
109234241
NCBI-ProteinID:
XP_019255684
UniProt:
A0A1J6HX19
LinkDB
All DBs
Position
11:complement(24300867..24304318)
Genome browser
AA seq
645 aa
AA seq
DB search
MPTLVNYSGDDEFYSGGSLCSADLGLMLSLGHAQVYCPLRKRARISGPFVVEERTKNPSI
EILPDECLFEIFRRLQGGRERSAAACVSKRWLMLSSNVRSSEICHTDLSVADNGASSDAK
MVSADEDVEVECDGYLTRCLEGKKATDIRLAAIAVGTSSRGGLGKLSVRGSNSVRGITNV
GLSAIAHGCPSLRVLSLWNVPYVGDEGLVEIARGCHSLEKLDLSQCPSISNKGLVAIAEN
CPSLTSLTIESCRNIGNEGLQAIGRCCTKLQSLTIKDCPLVGDQGVASLLSSGATMLKKV
KLNSLNITDFSLAVIGHYGKAITDLNLSSLRNVSQKGFWVMGNARGLQSLASLSITLCRG
ATDVSLEAVGKGCSNLKHMCLRKCCFVSDGGLVAFARAATGSLESLLLEECNRITQAGVL
NAVSNFGKLKSLSLVKCMGVKDLPLQASLLSPCESLRSLSIRSCTGFGSTSLAMVGMLCP
QLHHLDLSGLTGITDAGLLPLLEMSSKAGLVKVNLTDCLNLTDEVVLSLARLHGETLELL
NLDGCRKVTDASLVAIADNCPLLNDLDVSKCSITDSGVAALSHGVQVNLQILSISGCSMV
TNKSVPALKKLGESLVGLNLQHCNAISSSRVELLVEDLWRCDILS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcttgttaattacagtggtgatgatgagttctattcaggagggtcactttgt
tcagcagatttgggtcttatgttgtcacttggtcatgctcaagtttactgccctcttagg
aagagggcacggattagtggaccattcgttgttgaagagcggacaaagaatccatccatt
gaaatacttcccgacgaatgcctatttgagatcttcagaagattgcaaggaggccgcgaa
aggagtgcagcagcttgtgtttctaagcgctggcttatgctctcgagtaatgtaaggagc
tctgagatttgccataccgatctttcagttgctgataatggggcttcaagtgatgcaaaa
atggtctcagctgatgaagatgttgaagtagagtgtgatggataccttactaggtgttta
gaagggaagaaagctacagatattagacttgctgctattgcagtcggaacttccagccgt
gggggtctcggaaagctctcagttcgggggagcaactcggttcgtggtattactaatgtt
ggtctatcagcaattgcccacggttgtccttctcttagggttctttcattgtggaatgtt
ccttatgttggagatgaaggtcttgtcgagatcgcgaggggatgtcattcattagaaaag
ctggatctatcccaatgcccctcaatttccaacaaaggtctagttgcaatagcagagaat
tgcccaagtttgacttctttgacgattgaatcttgtcgaaatattggaaatgagggcctg
caagctattggaagatgctgtaccaaattgcagtctctgacaattaaagactgccctctt
gtaggggatcagggagttgctagccttctctcgtcaggtgctacaatgttgaagaaagtg
aaacttaattccctaaacatcacggatttctcgcttgctgtcatcggtcactatggcaag
gcgattaccgatcttaatctcagttcacttcgtaatgtcagtcagaaggggttttgggtt
atgggtaatgctcgtggtcttcagtctctggcttctttgtcgatcactttgtgcagagga
gcgaccgatgtgagtcttgaagcagtgggaaagggctgttcaaatcttaaacatatgtgc
cttcgcaagtgttgctttgtgtctgatggtggacttgttgcttttgctagagctgcaaca
ggatctcttgagagtctcttgttggaagagtgcaacaggatcacccaagcgggcgttcta
aatgcggtttcaaacttcggcaagttgaagtctctttccctagtgaagtgtatgggagtc
aaagatttacctctacaagcttcattgttgtcaccctgtgaatctcttcgatcgttgtcc
atccgcagctgtacaggattcggtagcactagcttagcgatggttggtatgctgtgtcct
cagctacatcacttggatctcagtgggcttaccggaataacagatgccgggcttctccct
cttttggagatgagctccaaggcaggacttgtcaaggttaatcttaccgactgccttaac
ttgaccgatgaagttgtgttgtcgctagctaggctacatggcgagaccttggaattgctg
aatcttgacggatgcaggaaggttacagatgcaagcttggttgcaattgctgataattgt
ccattacttaatgatctcgatgtttctaagtgttcaataactgattctggtgtagctgct
ttatcccatggagtgcaagtaaatttgcagattctttcgatatcaggttgctccatggta
acaaacaagagcgttccagctcttaaaaagttgggggagagcttagtcggtttgaatctc
caacactgcaacgcgatcagtagcagcagagttgagcttcttgttgaggacttgtggaga
tgtgatatcctctcctaa
DBGET
integrated database retrieval system
