Nicotiana attenuata (coyote tobacco): 109234436
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Entry
109234436 CDS
T05870
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109234436
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109234436
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Gene cluster
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Phage_TAC_4
Motif
Other DBs
NCBI-GeneID:
109234436
NCBI-ProteinID:
XP_019255968
UniProt:
A0A1J6I9B1
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Position
11:complement(44443735..44446674)
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AA seq
447 aa
AA seq
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MKGPTIMHSFFVLFFTFAAIIPSFKAHIGEFDEVWRRRAEEARKVALQTYESEPENVTLA
FNKQVRDAMKELSEVIPQNDTRRELGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADC
AMGFGSKATGGKAGRFYVVSDSSDDYTDPKPGTLRHAVIQKEPLWIIFDRGMTIRLHQEL
IMQSDKTIDARGANVHIAGGAGIMIQYIKNVIIHGLHIHDIVQGNGGMVRDAVDHIGLRT
MSDGDGISIFGASNIWIDHVSMWNCYDGIIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQQMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSKNPTIISQGN
RFIAPPDIFKKQITKREYSPESVWMQWTWRSEGDLYMNGAYFVQSGDPDWSKKHQHLYDG
ISAAPADQVTWITRFAGALGCKVGQAC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggacctacgattatgcattcgttcttcgttttatttttcacatttgctgcaata
attccaagtttcaaggctcatattggagagttcgacgaagtgtggaggaggagagccgag
gaagccagaaaggtcgctctccaaacttatgagagcgaacctgaaaatgtcacattagca
tttaacaaacaagtccgtgatgctatgaaggaattaagtgaagtaataccacagaatgac
acaagaagggagctaggtaccaaaaaatacacgggcccttgtatggtcacaaatccaatt
gataagtgctggagatgtgaccctaattgggcagacaacaggaaaaagctagcagattgt
gcaatgggctttggatccaaggccactggcggaaaggccggtaggttctatgtcgtcagt
gattcttcagatgattataccgacccaaaaccaggaaccctacgtcatgctgttattcaa
aaggagccattgtggatcatatttgacagaggaatgaccattaggctacaccaggagttg
atcatgcagagtgataaaactattgatgctcgtggagctaacgttcacattgctggtggc
gctggtatcatgatccagtatataaaaaacgtgattatacatggcctacacattcatgac
attgtccaaggaaatggtggcatggttagagatgcagtggaccatattggactacgaaca
atgagtgatggagatggcatttccatatttggtgcgtctaatatttggattgatcatgtg
tcaatgtggaattgctatgatggaattattgatgctgttgaaggatccaccggtatcacc
atatcaaatggccatttcacagatcataatgaggtgatgttgtttggtgcgagtgatagt
tcttcaatagatcaacaaatgcaaattacactagcattcaatcattttggaaagagattg
gtgcagagaatgccgaggtgcagatggggatacatccatgttgttaataatgactatact
cactggaatatgtatgctattggtggtagtaaaaatcctaccattattagccagggtaat
cgtttcattgctcctcctgacatcttcaagaaacagataacaaagagggagtactctcca
gaatcagtgtggatgcagtggacatggagatcagagggagatttatacatgaatggggca
tattttgtacaatctggtgatcctgattggtcaaagaaacatcaacatctttacgatgga
atatcggcagccccagcagatcaagttacttggattacaaggtttgcaggggcacttggt
tgcaaggtaggacaggcttgttag
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