Nicotiana attenuata (coyote tobacco): 109234898
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Entry
109234898 CDS
T05870
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03410
Base excision repair
nau03420
Nucleotide excision repair
nau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109234898
03410 Base excision repair
109234898
03420 Nucleotide excision repair
109234898
03430 Mismatch repair
109234898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109234898
03400 DNA repair and recombination proteins [BR:
nau03400
]
109234898
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109234898
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109234898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
RCF1-5-like_lid
AAA_30
AAA_22
AAA_19
BRCT_2
RuvB_N
AAA_assoc_2
AAA_5
AAA_14
AAA_18
nSTAND3
AAA_16
NTPase_1
Gp44_lid
Sigma54_activ_2
Zeta_toxin
DNAX_ATPase_lid
SurA_N
Motif
Other DBs
NCBI-GeneID:
109234898
NCBI-ProteinID:
XP_019256483
LinkDB
All DBs
Position
11:complement(52556398..52574312)
Genome browser
AA seq
877 aa
AA seq
DB search
MXLLLXSGRGSARKSVISDESDDDLKDTKSDPKPTGRGRGGRAAQAGGKGIPLDESDDDA
SADKDTKSGGRGRGGKGPSAVPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPNC
LAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKELG
TAFLTEDGLFDMIRSSKKSKSATQPESKKSVDTVVSPAKRNSQNTSDGTGSTATKILAAK
ELTPSASPAKRKGQAKESSLPWTEKYRPKAIVDIIGNKSLVEQIQRWLESWDEHFLNAAS
KGKGKKQNDSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDSRGKADSKIEKG
IGGSTANSIKELVSNESLGANIGRSHHQKTVLIMDEVDGMSAGDRGGVADLIASIKLSKI
PIICICNDRYSQKLKSLVNYCLPIVFRKPTKQQMAKRLKQVANAEGLQVNEIALEELAER
VGGDMRMALNQLQYMSLSKSVIQYDDIRQRLLSSSKDEDISPFKAVELLFDLIAKNLKID
RRIDLSMSDPDLVPLLIQENYLNYKPSSVGKDDDGLKRMSLIARAADSIANGDLINVQIR
RYQQWQLSPAGCLSSCIIPASLLHGQRQTLEQGERNFNRFGGWLGKNSTMGKNYRILEDL
HVHLLASRESYLGRANLRLDYFTLLTKKLTDPLKLLPKDEAVENVVDFMDSYSISQDDFD
NIVEISKFKGHPNPLDGIQPVVKAALTRAYNKGSKSRVIRTADLMSLPGIKKAPKKRVAA
MLEPLDEGLAEENGEAIAEDEENSSEPEDIDVEKKLESDLQSLSSKGIQVNVDLKGAGGK
KPSAGRGRGSSSSREKGGAESSGKRGGRGSGATKRKR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggnactactgctattntctggcaggggatctgcacggaagtctgtgatcagtgatgaa
agtgacgatgatcttaaggatacaaaatctgatcccaaacctactggaagagggcgtggt
ggacgagcagctcaggctggtgggaaaggcatccctcttgatgaaagtgatgatgatgcc
tcagctgataaggacaccaaatctggtggacgagggcgtggtggtaaaggaccatctgca
gtaccaagtggtggacgaggcagaggtggtggaggacggggcggtttcatgaattttggt
gaaagaaaagaccctcctcacaagggggaaaaggaagttcctgaaggtgccccaaactgt
ttagctggtttgacttttgtaattagtggaactctggacagtttagaaagagaagaagct
gaggatttgattaaacgccatggtggtcgtgttacaggatctgttagcaagaaaacgaat
tatcttttatgcgatgaagacattgagggacggaaatcctctaaagccaaggaactcgga
actgcatttctcactgaggatggtttgttcgatatgatccggtcatcaaagaaatcaaaa
tcagctacacagcccgagtcaaagaaatcagtggacactgttgtttctcctgcaaagaga
aattcacaaaatacaagtgatggaactggaagcactgccacaaagattttagctgccaaa
gaattgacacctagtgcatctcctgccaagaggaaaggccaagctaaagagtcttcacta
ccatggacagaaaaatacaggcccaaagctattgtagacataatagggaataagtcactg
gtagaacagattcagcgttggctggagagctgggatgagcattttctaaatgcagctagt
aaggggaaggggaaaaaacagaatgactctggtgctaaaaaggcagttctgttgagtggt
atgccgggtatagggaagactacatcagcaaaggtggttagtcagctactgggtttccaa
accatcgaggtaaatgctagtgatagtcgtggaaaggctgattcaaaaattgagaaagga
attggtggtagtactgctaattccataaaagaacttgttagcaatgaatccctaggtgct
aatattggcagatcgcaccatcagaagactgttctgattatggatgaggttgatggcatg
tctgctggagatagaggtggtgttgccgatcttattgctagcatcaagttatccaaaatt
cctattatctgcatttgtaatgatcgctacagtcagaaattgaagagccttgtcaattat
tgcttaccaattgtcttccgaaaaccgaccaagcagcagatggcaaagaggttaaagcaa
gtggcaaatgctgaaggccttcaagtcaatgagattgctcttgaggaattggcagaacgt
gttggtggcgatatgcgtatggctctaaatcaattgcaatacatgagtctctccaagtct
gtgatccaatacgatgatataagacagcgccttctaagcagttcaaaggatgaagacatc
tcacccttcaaagctgtcgaactgttgtttgatttaattgccaagaacttgaaaatagat
cgaagaattgatctaagtatgagtgacccagatcttgttccgcttcttatacaggagaac
tatctcaattacaagccaagttctgttggcaaagatgatgatggtttaaagcggatgagc
ctaattgcacgtgctgctgactctattgcaaatggtgatttaataaatgtacagattcgt
agataccagcagtggcaactatctccagctggttgcctttcgtcttgcattattcctgct
tcgttgttgcatggacagaggcagactcttgagcagggagaacgcaactttaataggttt
ggtggctggctaggaaagaactctacaatgggaaagaattaccggattttggaggacttg
catgttcacctactcgcttctcgtgaatcatatttgggaagggcaaacctgagacttgac
tactttactcttcttacaaagaagttgacagatccattaaaactgctacctaaggatgaa
gctgtcgagaacgttgtggatttcatggattcgtactctataagccaggatgacttcgat
aatattgtggagatatcaaaattcaagggacatccgaatccactggatggtattcagcct
gttgtgaaagctgcactgacaagggcatacaacaaaggaagcaaatcacgtgttattcgc
acagcagatttaatgtcccttcctggaattaaaaaagctcccaagaagcgggttgcagcg
atgctggagccactagatgaaggcttagctgaagaaaatggtgaagcaattgctgaagat
gaagagaactcatcagagccagaggatatagatgttgagaaaaagttggagtcagatctt
caaagtctcagttcgaagggaatccaagtaaatgtagatctgaagggtgccggtggaaag
aagccgtctgctggaagaggaagaggaagttctagtagcagggagaaaggaggcgctgaa
tcctcgggcaagagaggtggccggggttctggagctaccaagagaaagaggtga
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