KEGG   Nicotiana attenuata (coyote tobacco): 109235157
Entry
109235157         CDS       T05870                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:nau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nau04121]
    109235157
   03400 DNA repair and recombination proteins [BR:nau03400]
    109235157
Enzymes [BR:nau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109235157
Ubiquitin system [BR:nau04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109235157
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    109235157
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 DEAD Rad50_zn_hook ResIII zf-RING_5 zf-RING_UBOX zf-rbx1 zf-ANAPC11 Prok-RING_4 zf-P11
Other DBs
NCBI-GeneID: 109235157
NCBI-ProteinID: XP_019256688
UniProt: A0A1J6HRT4
LinkDB
Position
12:complement(2223737..2229361)
AA seq 885 aa
MVEGQDPVEVFMRLERWPLSPLEVEAEEEENESQSSGEMYMVGFVIANVVGLQYYSGRIS
GREIVGLQREPLNQYDPNAIKVLNTRSVQVGHIERSAARVLSPLLDAHVITIDGIVPKVA
RPGNRYKLPCQVHIFARLEAFGIVKSAITNGGLYLIGESDPSFTLSEAEVVKEKRSTPEG
RDIDEIFKLLDEKVSKKEELKALEPPKNIIKSELLLHQKEGLQWLVQRENSEELPPFWEE
KEGSYVNVLTNYSTDKRPEPIRGGIFADDMGLGKTLTLLSLIALDKRGGFISSSIKSGHQ
NAERDDGLDEEEDKNTASISKRNKRGRVSRKTDNSRKKQKTERVNTLQVKEKSACSPDRR
SGNSSSGTTLVVCPPAVLSAWISQIEEHTKPGSLKSYIYYGERTGDANELAKFDIVLTTY
SILASEDTWIDSPIKKIEWWRVILDEAHVIKNVNAQQSRAVNNLRAKRKWVVTGTPIQNN
SFDLYSLMAFLRFEPLSIKAYWNSLIQRPLAQGDEKGVSRLQVLMSTMSLRRTKEKALIG
LPSKSIETFFVELSGEEREIYDQMESEAKRIVKQYMSSDSSMKNYWTVLSVIVRLRQICI
DLALCPSDLRSLLPSNKIGDVHSNPQLLDKMLSALQDDEGIDCPICIFPPTDSVITCCGH
IFCKSCILKTIKRAKPCCPLCRHPLSESDLFFCPPEASNAANSGSPSTASSKVKALLKLL
CASRDESSNRKSIVFSQFRKMLLLLEEPLKAAGFKILRLDGSMNARKRGQVIKEFEIPAP
EGPTILLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRMIA
RSTIEERILELQEKKKLLARKAFGKKGSKDQRDISLDDLRTLMHL
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggtggaagggcaagacccagtagaggtattcatgaggctagaacggtggcctctatca
ccgcttgaagtggaggcggaggaggaggagaacgagtcccagtcatcaggggagatgtac
atggtgggttttgtgatcgccaacgttgtgggtcttcagtactacagtggtagaatcagc
ggccgagaaatcgttggccttcaacgtgaacccctcaatcagtatgacccaaacgcgatt
aaagttctcaacactcgttccgttcaagttggacacatcgaacgctccgccgccagggtt
ttatcaccgcttttggacgcccacgtcatcaccattgacggaattgttccaaaggtggct
cgtccaggaaacagatacaaactcccctgtcaagttcacatctttgcgagattggaggca
tttggaattgtaaaatcagcaattacaaatggtgggttgtatttgattggcgagagcgat
ccgtcgtttacactttctgaggcggaggtagttaaggaaaaaagaagtacaccagaaggg
agggacatcgatgagatattcaagcttttggatgaaaaagtcagtaaaaaggaagaactg
aaagcattggagccacccaaaaatataataaagtcggagcttcttctgcaccagaaggaa
ggattgcagtggttggttcagagagagaactctgaagaattgcctccattttgggaagag
aaagagggtagttatgtgaatgttttgacaaactactctaccgataaaagacctgaacca
ataagaggtggaatatttgcagatgacatggggttggggaagacgcttactcttctttct
ttaattgctttggataaacgtggtggttttatttcatcttcaatcaaaagtggtcatcaa
aatgccgagagagatgatggattagatgaagaggaagacaaaaatactgcttctattagt
aagaggaataagaggggaagagttagtagaaagactgacaattcacgaaagaagcaaaag
actgaacgagtaaacacactacaagtgaaggaaaaatcagcttgcagtcctgacagacgt
tctggcaattcaagttcagggacgacattggttgtttgtccaccagctgtactgtcagcg
tggatctcacaaattgaggagcacactaaaccagggtcgctgaagtcatatatttattat
ggagagcggacaggagatgccaatgagctggcaaagtttgacatagttttaactacttat
agtattctggctagtgaagacacatggatagattctcccataaaaaagatagaatggtgg
cgagttatcttggacgaggcacatgtcattaagaatgtgaatgctcaacaaagtcgagca
gttaacaacttgagagctaaacggaagtgggtggtaacaggaacaccaatacaaaataac
tcattcgatttgtattctttgatggcatttttgagatttgagcctctgtctattaaagcc
tattggaacagtttgatacaacgtccacttgcccagggagatgagaagggggtgtcaaga
ctgcaggtcctaatgtcaaccatgtctttgagaaggaccaaagaaaaggctctaattggt
ttgccatcaaaatctattgagactttctttgtggaactttctggagaagaaagggaaatt
tatgatcagatggaatcagaagctaagaggattgtcaagcaatacatgtcttctgatagc
tcaatgaaaaattattggactgtgctgagtgtaattgtacgacttcgacaaatctgtatt
gatttagccttgtgtccttcagatctgagatcgttactgccatcaaataaaattggagat
gtgcacagcaacccacagttgttggacaaaatgctctcagcattgcaagatgacgaggga
attgattgtccaatctgcatttttccaccaaccgatagtgtcattacttgttgcgggcat
atattttgcaagtcttgcattttgaagaccataaaacgtgccaagccttgctgcccactt
tgccgtcatccgctgtcagagtctgacctatttttctgcccacctgaagcatctaatgca
gcaaatagtggaagtccttccactgcatcttccaaagtgaaagcactcctaaaacttctc
tgtgcatcaagagatgaaagctctaacagaaaatcaatcgtcttctctcagttcaggaag
atgttgctcctacttgaagagccgcttaaagcagctggttttaagatattgcggttagac
gggtcaatgaatgcgagaaagagaggccaagtaattaaggagtttgaaatcccagctccg
gaggggcctaccatcttgcttgcaagtctaaaagcttcaggtgctggaataaatcttaca
gctgcgtctagagtctatctactggaaccttggtggaatccagcagttgaggagcaagct
atggacagagtccatagaattggtcaaaaggaagatgtgaagattgtgaggatgattgca
agaagcaccattgaagagaggatacttgaactgcaagaaaagaagaaactgctggcaagg
aaggctttcgggaagaagggctcgaaagatcaaagggacattagcttagatgaccttcgc
accttgatgcacttgtga

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