Nicotiana attenuata (coyote tobacco): 109235504
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Entry
109235504 CDS
T05870
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109235504
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
109235504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
AAA_18
AAA_14
nSTAND3
NACHT
NPHP3_N
Viral_helicase1
Cytidylate_kin
ATPase_2
AAA_2
AAA_28
RNA_helicase
AAA_30
KAP_NTPase
AAA_5
TsaE
TIP49
SLFN-g3_helicase
AAA_24
RuvB_N
ABC_tran
DUF815
AAA_11
AAA_33
AAA_17
Rad17
AAA_7
bpMoxR
PduV-EutP
ResIII
AAA_19
IstB_IS21
AAA_3
nSTAND1
Mg_chelatase
Cytidylate_kin2
SRPRB
NB-ARC
CPT
KTI12
SPC25
NTPase_1
Motif
Other DBs
NCBI-GeneID:
109235504
NCBI-ProteinID:
XP_019257193
UniProt:
A0A1J6IEC3
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All DBs
Position
12:complement(29297511..29306671)
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AA seq
455 aa
AA seq
DB search
MSAPMEVSMVNAPEVNTSEQNGIVPDPPPPPSLTLPEEKVLVSVEVCLKPSSAARIDDVT
LAVERMLEKRSMSYEDGPIPIPIDDLFLAENVQHICVCDTDVWVENRDILLFWQVKPVVH
VFQLSEEGPCEELSGDGQLSTFNEWILPAKEFSGMWESLIYESGLKQRLLRYAASALLFT
EKGVNPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQSQLVEVNAHSLFSK
WFSESGKLVAKLFSKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNAL
LTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLR
TGVLSNSQDAYHLLPSFAGLRENLSIVTTESQMSIHLGKQLLEAAEACEGMSGRSLRKLP
FLAHAALASPYNCEPGKFLHVMMETAKRERSELSE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctccaatggaagtctccatggtcaacgctcctgaagtcaacaccagtgagcaa
aacggcatcgttccggaccctcctccacctccgtcactcacattgcctgaagaaaaagtt
cttgtttcagttgaagtttgtttgaagccttcaagtgcagctcgcattgatgatgttaca
ttagctgttgagagaatgctggaaaagaggagcatgagctacgaggatggtccaattcca
attccaattgatgatctctttcttgctgaaaatgttcagcacatatgtgtttgtgacaca
gatgtctgggtggagaaccgagatattcttctgttctggcaagtaaaaccagttgttcat
gtattccagcttagtgaggaaggaccatgtgaagagttgagtggggatggccagctttct
acatttaatgaatggattcttccggcaaaggaatttagtggaatgtgggaaagcttaata
tacgaatctggtctcaagcagagattgttgcgttatgcagcaagtgctttgctgtttacc
gaaaagggagttaatccattcctagtatcctggaatcgtattattcttctgcatggacct
ccaggaactggaaagacatctttatgcaaagctttggcgcagaagctttccatacgcttt
agctctagatacccacagagccaattggtggaagtcaatgcacattcattgttcagtaaa
tggttttctgaaagtggcaagctggttgcaaagctgttctcgaaaatccaagaaatggta
gaggaagaaaacaatctggtatttgtcctgattgatgaagttgaaagccttgctgctgct
agaaaagctgctttgtctggatctgaaccttcagattctatccgggtagtgaatgctctg
ttgacccaacttgacaagttgaagtctgcaccaaatgtcataattctcactacatccaac
atcactgctgctattgatatagcttttgtggatcgtgctgacattaaggcatatgtggga
ccaccaactcttcaagcacgttatgagatactgagatcatgcttgcaagagctattgcgc
actggcgtcttgtcaaattcccaggacgcttaccatcttcttccaagttttgcgggtttg
agggagaacctgagcatagttacaaccgagtctcagatgtcaatacaccttggtaaacaa
ctacttgaagctgcagaggcatgtgagggaatgagtggaagatcacttagaaagctacca
ttcttggcgcacgcagcacttgctagtccttacaattgtgagcctggcaaatttttgcat
gtaatgatggaaacagctaaaagagaacggtcagagctgtccgagtga
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