Nicotiana attenuata (coyote tobacco): 109235526
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Entry
109235526 CDS
T05870
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109235526
Enzymes [BR:
nau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109235526
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
Other ribosome biogenesis factors
109235526
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
FtsJ
Methyltransf_31
Ubie_methyltran
PCMT
ASPP2-like_RA
RASSF8-10_RA
TRM
Motif
Other DBs
NCBI-GeneID:
109235526
NCBI-ProteinID:
XP_019257222
UniProt:
A0A1J6HTB2
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All DBs
Position
12:complement(32115141..32122526)
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AA seq
484 aa
AA seq
DB search
MARKKPQGNTKPAVNKPNQKRLSNAERSAYFARREAAKVLRTVLQGDARRRAVGSIKSLV
YSPSVRNKKATYALVCQTLKYLPIIKDVFDIANVLSSKWKRQEELMYIILYDILFGQEAL
LAGDAEKILLQRKDVLQAALAKLLVRKKVKHVSDLMTSYKISDLPKPRYARVNTLKMDVE
SALLEFKKQYEVSQDAMVPDLLIFPPRTDLHDHPLVKSGSVFLQGKASSMVAVALGPKPG
WEVIDACAAPGNKTVHLAALMKGKGKIIACELNKERVKRLKDTVKLAGATNVKVKHDDFL
NMSSEDPAYSKVQAILLDPSCSGSGTVVDRLDHLLPSYTADSSDVNRLEKLAAFQKKALE
HALSFPTVERIVYSTCSINQVENEDVINSVLPLASSYGFELTTVFPQWPRRGHPVFDGSQ
HLLRTDLIEDKEGFFIALFVRKGASTPAKHSRDVENTLRAIQRRKKRRTNSFFLFKTFGL
FLQS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaagccgcaagggaacactaaaccggcggtgaataagccgaaccagaag
cggctgagcaacgccgagcgctcggcctactttgcacgtagagaagccgccaaggttttg
cgtaccgttctacaaggagacgctcggcgccgagccgttgggtccatcaagtcgctggtg
tatagtccttccgttaggaacaaaaaagctacctatgctttggtttgtcaaaccctcaaa
tatcttcccattatcaaggatgtctttgacattgccaatgtgttgagtagcaagtggaag
aggcaagaagaattaatgtatataatcttgtatgacattctttttggccaggaggcttta
ttagctggtgatgcagaaaaaattcttctgcagcggaaggatgtgttgcaggcagctctt
gccaagcttttagtgcgaaagaaagtaaaacatgtctcagatttgatgacttcttataaa
atctcggaccttccgaaacctcgttatgctcgtgtaaatactctgaagatggacgtagag
tctgccctgctcgaatttaagaaacagtatgaggtctctcaggatgccatggttcctgac
ctgttgatttttccaccaaggactgacctgcatgatcatcctttggtgaaaagtggaagt
gtgtttttgcagggtaaggcgagttccatggttgcagttgctcttgggcctaaacccgga
tgggaggtcattgatgcatgtgcagcaccagggaacaaaactgttcatcttgctgctcta
atgaagggaaaaggaaagataatagcttgtgaacttaataaagaaagggttaaacgtctg
aaagacactgttaaactggctggagcaactaacgtgaaagtcaagcatgacgacttctta
aacatgagttctgaagacccagcatactcaaaggttcaagcaatacttttagatccatca
tgttctggatctgggacagttgttgatagattagatcatctgctcccctcatatactgca
gattcctctgatgtaaatagactagaaaagctggctgctttccagaaaaaggctttggaa
catgcattatcttttccaactgttgagagaattgtttacagcacatgttctattaaccaa
gttgagaatgaagatgtcatcaactctgttctgcctcttgcttcttcttatggttttgaa
ctgacgacagtctttccccaatggcctcgccgtggtcatccagtttttgatggatctcaa
catttactgagaacggacctcatagaggacaaggagggcttttttattgctttatttgtt
agaaagggagcgagcactccagccaagcacagcagagatgttgaaaacactttacgagcc
attcaacgaaggaagaaaagaagaacaaattctttcttcctcttcaaaactttcggtttg
ttcttgcagtcctag
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