Nicotiana attenuata (coyote tobacco): 109235622
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Entry
109235622 CDS
T05870
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03420
Nucleotide excision repair
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109235622
09124 Replication and repair
03420 Nucleotide excision repair
109235622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nau03051
]
109235622
03400 DNA repair and recombination proteins [BR:
nau03400
]
109235622
Proteasome [BR:
nau03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109235622
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109235622
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
CUE
Rad60-SLD
TECR_N
UBA_3
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
109235622
NCBI-ProteinID:
XP_019257345
UniProt:
A0A1J6HTU8
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Position
12:complement(43247631..43252629)
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AA seq
366 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIIAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLL
ENNVSEDGFLVVMLSKSKTAGSSGTSSAPPSAPTVNPTPAPEVTPPAPEPKDVASASDAA
TASLPTDNFSQAASNLVAGNNLEQTIQQIMEMGGGNWDKETVTRALRAAYNNPERAIDYL
YSGIPETAEVAVPVASSGVNSALGTTTVPAAPVSGAPNSAPLNLFPQENVAGAGGAALGS
LDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRMIQEHHQEFLQLINEPVDGS
DGDLFDQPEQDMPHTVSVTPQEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLEH
AGDYED
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttactgtgaagactctgaaaggcagtcacttcgaaattagggttcagccttcc
gatacgattatcgcagtcaagaaaaacattgaggatatacaaggaaaagataattatcca
tgtgggcagcagttactgattcacaatggtaaggttttgaaggatgaaagcacgttattg
gaaaataatgtttctgaagatggctttcttgttgtcatgcttagcaagagcaagactgct
ggttcaagtggaacatcatctgcaccgccttccgctcctacagtcaacccaactccagca
cctgaagtgactccaccagcaccggagcctaaggatgttgcttcagcttctgatgccgca
acagctagtcttccaactgataattttagtcaagctgcatcaaatctagttgctggaaat
aatcttgagcagacaatacaacaaataatggaaatgggtggtggcaactgggataaagaa
acagtgacacgggcacttagagcagcttataacaatcctgaaagggctattgattacttg
tattcagggattcctgaaacagcagaagttgctgtacctgtggctagtagcggggttaat
tctgcactagggactactactgtgcctgctgcccctgtttctggagcacccaattcagct
cctttaaatttgtttccgcaggagaatgttgctggtgctggtggtgctgcccttggatcc
cttgattttctcaggaataaccaacagtttcaagcattacgttctatggttcaatctaac
ccgcaaattctacagcctatgcttcaggaacttggaaagcaaaatcctcaacttttaaga
atgatacaagagcaccatcaagagtttcttcaactaatcaatgaacctgtagatggttct
gatggggacctatttgatcagcctgagcaggacatgccccacacagttagtgtcactcca
caagagcaggaggcgatcgagcgactcgaggcaatgggttttgatcgagctcttgttatc
gaggcctttttagcttgtgatcgcaatgaggaactagctgcaaattatttattagagcat
gctggagattacgaagattga
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