Nicotiana attenuata (coyote tobacco): 109235659
Help
Entry
109235659 CDS
T05870
Name
(RefSeq) autophagy-related protein 2 isoform X1
KO
K17906
autophagy-related protein 2
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
109235659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109235659
03029 Mitochondrial biogenesis [BR:
nau03029
]
109235659
Membrane trafficking [BR:
nau04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109235659
Mitochondrial biogenesis [BR:
nau03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109235659
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
109235659
NCBI-ProteinID:
XP_019257396
UniProt:
A0A1J6HU07
LinkDB
All DBs
Position
12:45721761..45739934
Genome browser
AA seq
1983 aa
AA seq
DB search
MFPWNFARSAETLFSRWAIKRVCKFLLKKKLGKFILGDIDLNQLDVQLSAGTIQLSDLAL
NVDYLNQKFGSTAAVYVQEGSIGSLLVTMPWKGDGCRIEVDELELVLAPDANFSQSTLGN
CLSTESSVNQNLGNRNDDNVDEAGAKTNAFDVHEGVKTIAKMVKWLLTSFHVEVRKLIIA
FDPCLGEEKRTGLCKTLVLRVTEVECGTCISEGASLDCEAVDDNFLGLTQMTNFIKFSGA
VLEFLQIDEIVDKKPNPCTSGTITAEWSSCSPNVTTPIITGERGGLAGNLKLTIPWRNGS
LDICKVEADASIDPLVIKLQPSSIRCLIYLWGIFKDMGEKKDTEFSPCDSVVTCDSTRAD
TSMLNMDEVLPGSKAFSAEHAFNSEPVREALLSESCLISDWVSRSRKINNEEEPDFGESV
HQFFECFDDLRNSQSALGSSGMWNWTCSVFSAITAASNLASGSLLIPSDQQHLETNLRAT
VAKVSLLFSFIDEEERHCCSVDADKGDAGFCVHYVSANFQDLLLLLQVRRQEMNFEATVQ
HMQLTDHFSRKDDTVDFKLRIYNDIKVIQDAVQTALPPLDWSTNTVDLDNQNASAAPNPL
GMNFTDGFTHPRNKISMFADDVVQVELLKTFGACLCQATKSSSGNSFVGPTSFSLKLPPF
IFWVNFDLLSETSELFKKIMDPIEMTGTLAREHRHMDSSKGIGRTRPCSGTRRISEQESF
RGTVSLPTARIILSFPCGNDDGFKSYYSWQQFISLDVSSPSIPGEKASHATKKSAATSSK
SRNSVATLCSLYLNFGKLDVNLITSLSGENAEITSGSASKYRLLAQKIMTTSNGRGPSVV
TFSWQDSARTSPWIMKRAKQLACSDNARCLEKFRRKGYEFSSVTAVKGSEDFNGNVREEM
IISSGFCIHAHLSPVTIALSKSEFVKLNDLLSQVIDRLSGLDLVPLDTEEVSSSSQSSVL
VECDSITILSNAEVVENNNKGSLQNEITGSWHSFRLELLNFGLLSVLDIGGTNGASFLWV
THGEGNLWGSITGVPGEEFLLISISDSSSSRGDGEGSNVLSAKLSGSDIIHFHDPRSSSM
SITIRCGTIVAVGGRLDWFDTIFSLFAAPSPETKQECDSNVQKEDCETSVPFESSFILSL
IDIALSYEPYLNKLMIHGCADSQSSSPNCEEAIAEQYVACLLAASSLRLSSTTVADSAIS
SYKITVQDLGLLLSAMRAPNCAGSVYSVEHLRKIGYVKVAQQADVEALLRISSDNGGLWE
IGCSESQIVLNTCHDTASGLTRLAAQLQQLFAPDLEESVVHLQTRWNNVQQAREGKEFST
FDVDSVSSTSDMQAMTGDVSSEGGNINLMDEICEDAFQLDHGEDGQADYPESPIDLSPNN
SFIGETFYYSNEDSPRFLNSSPVTGSVPVVGQETSETSLSPEQLPQLIEEYFLSDLCPLS
ELTLTDQSSKDNLRYTPSPMRSGDDLRENTGWYGDNSLRILDNHVSEVNRKAGSLELTES
EASSILSEPDENKNVKGRIVLNNMNIIWRLYAGSDWQNVQNNAQQSTGTCGRDTTVCLEL
TLSGVRFQYDIFPDGGTWVSRQSITVHDFCVKDNSNAAPWKLVLGYYQSKGCLRKSSSKA
FKLDLEAVRPDPAIPLEEYRLRIALLPMRLHLHQNQLDFLISFFGGTQSAVTPSQSTSQS
LSKSDIVARRTEVGGDAVIEEALLPYFQKFDIWPVHLRVDYSPCHVDLAALRGGKYVELV
NLVPWKGVDLHLKHVQALGVYGWSGVCEIIIGEWLEDISQNQIHKLLKGLPPIRSLVAVG
SSAAKLVSLPVKSYKKDQKLLKGMQRGTIAFLRSISLEAIGLGVHLAAGAHEILLQAEYI
LTSVPPSVPWPVQSGGNTSVRFNQPRDARQGIQQAYESMSDGFSKSASALIRAPMKRYQR
GAGMGSALATAVQAAPAAAIAPASATARAVHCALLGVRNSLNPERKKESLEKYLGTSPPQ
QYM
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtggaatttcgcgaggtctgcggagactttgttctcgcgatgggcgatcaag
agggtttgcaagttccttttgaagaagaaattggggaaattcatactaggcgatatcgat
ctcaatcagctcgatgttcagctcagtgctggtactattcagctctctgatctagctctc
aatgttgattatctcaatcaaaagtttggttccacagcagccgtgtatgtgcaagaaggg
tcaattggctctctgcttgtgacaatgccttggaaaggggatggttgtcggatagaggtg
gatgaacttgagcttgtgcttgctcctgatgcaaacttttctcaaagtacactcggaaat
tgtctttcaaccgaatcttcggtcaaccaaaatttgggaaaccgtaatgatgataacgta
gacgaggctggtgctaaaacaaatgcttttgatgttcatgaaggagtcaagaccattgct
aagatggttaagtggttgctcactagctttcatgtagaagttagaaaattgatcatagca
tttgatccctgtttaggtgaggagaaaaggacagggctttgcaaaacattagtattaaga
gtaactgaagtggaatgtggtacatgtatctcagaaggggcttctttggattgtgaagca
gtggatgataactttctggggttgactcaaatgacaaattttatcaaatttagtggagca
gttcttgaattccttcaaattgatgagattgttgataagaaaccgaatccatgcacttca
ggaacaattacagctgagtggtcaagctgttcaccaaatgtcacaaccccaataataact
ggggaaagaggcggacttgctgggaacttaaaattgactataccttggagaaatgggtcc
ctagatatttgcaaagtggaggcagatgcttctattgatcctctggtaatcaaacttcaa
ccgagtagcatcagatgcttaatatatttgtggggaatttttaaagatatgggggagaag
aaggatacagaattttccccctgtgattcagtagtgacttgtgattcaacaagggcagat
acttctatgctcaatatggacgaggtgcttccaggttctaaagcattttctgctgaacat
gcattcaacagtgaaccagtgagggaagccttgctgtccgagtcgtgtcttatatcggat
tgggtgagtagaagccgaaaaatcaacaatgaagaggaaccagattttggggaaagtgtg
caccagttttttgaatgttttgatgatctaagaaactcgcagtcagctttaggaagcagt
gggatgtggaattggacttgttctgtttttagtgcaataacagctgcctctaaccttgct
tctgggtcattgcttattccttctgatcagcagcatcttgaaaccaatcttagggcaaca
gttgctaaagtatctcttcttttctcttttatcgatgaggaagagagacattgctgcagc
gtggatgcagataaaggggatgctggtttttgtgttcattatgtaagtgcaaattttcaa
gatttgcttctactgttgcaggtacggcgtcaggaaatgaattttgaagcaacagttcag
catatgcaacttactgatcacttctcaagaaaggacgatacagttgatttcaaattgcgt
atctataatgacattaaagtaattcaagatgcagttcaaactgcccttccacctcttgat
tggtccaccaatactgttgatctggataatcagaatgcatctgctgctcctaatccatta
gggatgaattttacagatgggttcactcatccaaggaacaaaataagtatgtttgctgac
gacgtagtgcaggtagaattgcttaagacttttggtgcttgcctctgccaagccacaaaa
agttcttcaggaaactcatttgttgggccaacatctttttcattgaagttgccaccattt
attttctgggtaaactttgatttgttaagtgagacctcagaacttttcaagaaaattatg
gatcctattgaaatgactggcactctggcccgtgagcataggcatatggattcatccaaa
gggattggaaggactaggccttgctctggcactagaagaatttcagaacaggaaagtttc
aggggcactgtatctcttccaactgccaggattatattgtctttcccctgtggaaatgat
gatggttttaagagctattactcttggcaacagtttatttctcttgatgtatcttcacca
tcaattcctggggagaaagcaagtcatgcaactaaaaagagtgctgctactagttctaag
agtcggaattctgtggctacattgtgctctttgtacttgaattttggaaagcttgatgtc
aacttaattacatcattgtccggagagaatgccgaaattacctctggaagtgcttcaaag
tatagacttttagcacagaaaataatgaccacatcaaatggaagagggccttctgttgtt
accttttcttggcaggacagtgccaggactagtccttggataatgaagagagccaagcag
cttgcttgttcagacaatgcacggtgcttagagaagttcagaagaaaaggatatgaattt
tcctctgtaaccgctgttaagggttcggaggacttcaacggtaatgttcgagaagaaatg
attataagctctgggttctgcattcatgcacatttatctcctgttacaattgctctaagc
aaatcagaatttgtgaagttaaatgatcttctgagtcaagtgattgataggttatcggga
ctggaccttgttcctcttgatactgaagaagtgagttctagctctcaatcatcagttctt
gttgaatgtgattctataaccatattaagtaatgcggaagtcgtggagaataataataag
ggttcgcttcagaatgaaattactggttcttggcatagctttagactggaacttctgaat
tttggtctattatctgttttagatattggaggaacgaatggtgctagcttcctctgggtg
acgcatggtgagggaaacttgtggggttcaattacaggagttccaggtgaagagtttctc
ctcatctccatcagtgactcttccagcagccgtggtgatggagaaggttcaaatgtatta
tctgctaagttgtcgggttcagatattatccacttccacgatccacggagcagttccatg
tccatcaccatcagatgtggcactattgttgcagttgggggccgcttggattggtttgac
acaattttctccctttttgctgcaccctctcctgaaactaaacaagaatgtgatagtaat
gtgcagaaagaggattgtgaaactagtgtcccttttgaatcttcttttatccttagcttg
atagacattgccttgagttatgagccatacctaaacaaattgatgatccacggatgcgct
gattctcagtcaagttctcccaattgcgaggaggcaatagctgagcagtatgtagcatgc
ctgttggctgcatcttccttgaggctttccagtacaactgttgctgattctgctatcagc
agttacaaaattactgtgcaggatctgggtctgcttctttctgctatgcgtgcacccaac
tgtgctggcagtgtctacagtgtagagcatcttcgcaagattgggtatgtcaaagttgct
caacaggcagatgttgaagctcttttgagaatcagttctgacaacgggggtctttgggaa
attggttgttcggaatcacagattgttctgaacacttgccatgatacagctagtggattg
acgcgtttagctgctcaattgcaacagctgtttgcacccgacttggaagaatccgtggtt
cacttgcagacaaggtggaataatgttcagcaggcacgtgagggcaaagaattcagcact
tttgacgtggattctgtatcatcaacttctgatatgcaggctatgactggagatgtaagt
agtgaaggtggtaatatcaacttgatggatgaaatatgcgaagacgcatttcaactggac
cacggggaggatggccaagctgattatcctgaatcacccatcgatctgtcacctaataat
agtttcattggcgagacgttttactacagtaatgaagactctccaaggttcttgaatagc
tcgcctgtcactggctcagttcctgtagttggacaagaaactagtgagacttcattatca
cccgaacagctacctcagttaattgaagaatatttcctgtctgacctatgtcctttgtct
gaactaacactcacagaccaatcgtcgaaggataatcttagatatacacctagtcccatg
aggagtggtgatgatttaagggaaaatactggatggtatggtgacaactctttaagaatt
ttagataatcatgtttcagaagtcaacagaaaagctggttcactggagttgaccgaatcc
gaggcgtctagcattctcagtgaacctgatgaaaacaaaaatgttaagggtcgcatagtt
cttaataacatgaatatcatctggagattgtatgcaggatctgactggcaaaatgttcag
aataatgcacagcaatcaacaggaacttgtggacgggatacaactgtttgtttagaactg
acactctctggagtgcgatttcagtatgacatctttcctgatggtggaacttgggtatct
agacaatccataacagttcatgatttctgtgttaaagacaacagtaatgctgccccttgg
aaactggtgctggggtactatcaatcaaaaggctgtctaaggaagtcttcttccaaagca
tttaagctggatcttgaagctgtaagacctgatcctgctatccctcttgaggagtaccgg
ttacgcatcgctctcctcccaatgcgtttacatcttcatcaaaaccagttagattttctc
atcagcttctttggaggaacacagtcagctgttacaccatcccaaagtacttcacagagt
ctgagtaagtcggacatagtagcaaggagaaccgaagttgggggtgatgcagtcatcgaa
gaggcattgcttccttattttcagaaatttgatatctggccggttcatcttcgggttgac
tatagcccttgccatgttgatttagcagcattaaggggtggcaagtatgttgaacttgtt
aatcttgtaccttggaagggggttgacctgcatctcaagcatgttcaagctctaggtgtc
tatggctggagtggagtatgtgaaataataataggagaatggttggaagatatttcccaa
aatcagattcataaactattgaaaggccttcctcctattcgatcactggtagctgttggt
tccagtgcagcaaagttggtatctctacctgtgaagagttacaagaaggatcaaaaattg
ttgaaaggaatgcaaagaggtacaatagcattccttagaagtatttcacttgaagcaatt
gggcttggtgtgcatttggctgctggtgctcatgaaatccttctgcaagctgaatatatt
cttacaagtgttccaccatcagtaccatggcctgtgcaaagtggaggaaacactagcgtg
agatttaatcaacctagagatgcccgacaagggatccaacaggcttatgaaagtatgagt
gatggcttcagtaagtctgcttctgctttaatacgcgctcccatgaaacgatatcagcgt
ggtgctggaatggggtctgctttagcaactgctgtccaagcagctccagcggcagccatt
gcccctgcttctgccacagcacgagctgttcattgtgctcttctaggtgtaaggaacagc
ctcaatccggagcgtaagaaagagtctttggagaaatatttggggacttctccacctcag
cagtatatgtag
DBGET
integrated database retrieval system
