KEGG   Nicotiana attenuata (coyote tobacco): 109235714
Entry
109235714         CDS       T05870                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03010  Ribosome
nau04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    109235714
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109235714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:nau03011]
    109235714
   04121 Ubiquitin system [BR:nau04121]
    109235714
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nau04147]
    109235714
Ribosome [BR:nau03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    109235714
  Archaea
    109235714
Ubiquitin system [BR:nau04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   109235714
Exosome [BR:nau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109235714
  Exosomal proteins of colorectal cancer cells
   109235714
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 109235714
NCBI-ProteinID: XP_019257468
UniProt: A0A1J6IMQ7
LinkDB
Position
12:complement(49993244..49995208)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatattcgtgaagaccctgacggggaagactattaccttagaggtagagtcatcg
gacaccattgacaatgttaaggctaagattcaggataaggaaggcattccaccggaccaa
cagcggttgattttcgcaggaaagcagcttgaggatggccgaacactagctgactacaac
atccagaaggagtccaccctccaccttgtccttcgcctccgtggtggtgcaaagaagcgt
aagaagaagacttacactaagccaaagaagattaagcacaagaagaagaaggttaagctc
gctgtcctccagttttacaaggttgatgattctggtaaggttcagaggctccgcaaggag
tgtcccaatgctgagtgtggtgccgggactttcatggctaaccactttgacaggcactat
tgtggtaaatgtgggcttacctatgtttaccagaaggctggtggtgattag

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