Nicotiana attenuata (coyote tobacco): 109235715
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Entry
109235715 CDS
T05870
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109235715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109235715
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
109235715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_HPS5
NBCH_WD40
KNTC1_N
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_VPS8
Peptidase_M10_C
Beta-prop_SCAP
Aldo_ket_red
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
109235715
NCBI-ProteinID:
XP_019257512
UniProt:
A0A1J6IRA7
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Position
1:complement(9019605..9024604)
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AA seq
477 aa
AA seq
DB search
MENPSSSSDLNPTLNPKTPSRINQLIPGFNSYHPSPSRTIYSDRFIPSRSSSNFALFDLP
LPPHSSSSEDSSNAYTSLLRSALFGSDCGSVVPPVTPEKSSGLNSRNLQISRPNCNIFRY
KSETRQSLQSLSPFGFDDQLPGFSPSPVKATRKVPRSPFKVLDAPALQDDFYLNLVDWSP
NNVLAVGLGSCVYLWHASSSKVVKLCDLGIDDSVSSVGWAQRGTHLAVGTSNGKVQLWDA
SRCKRIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRAQDDYVSKLSGHKSEVCGL
KWSYDSRELASGGNDNRLFVWNNHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTAD
RCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKIATL
TGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSKNTETEIGASSLGRTHIR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccccagttcatcttcagatcttaatcccactcttaatcccaaaaccccatca
cggattaatcaattaatcccgggttttaattcttatcatccatcgccatctcgaacaatc
tacagtgaccgtttcattcccagtagatcttcgtccaattttgccctttttgacctccct
ttgcccccacattcctcttcctctgaagattccagcaatgcatatacctcactgcttcgt
tcagctttgttcggatcagattgcgggtcggttgtgccgcctgttacgcccgagaagtcg
tcgggtttaaattcaagaaatttgcagattagtagacccaattgcaatatttttcggtat
aagagtgagacccggcaatctttgcagtcattgtcgccttttgggtttgatgatcagctc
cccggttttagtcctagcccggtcaaagctactagaaaagttccaagatctccttttaag
gtgttggatgcaccagcattgcaagatgatttttatctgaaccttgttgactggtctccg
aataatgtattagctgtgggactagggagctgcgtgtatctatggcatgcatctagtagc
aaggtggtgaagttgtgtgacctgggaattgatgatagtgttagttcagttggttgggca
caaaggggaacacatcttgctgttggaacaagtaatgggaaagtccagttatgggatgcc
tctcgttgtaagagaataaggacgatggagggacatcgattacgagttggtgcactggct
tggagctcatcagtactgtcttcaggaagccgagacaagagtattcttcagcgtgatatc
cgtgctcaagatgattatgtcagtaagttgagtggtcataaatcagaggtttgtgggctc
aaatggtcttatgatagccgtgaattagcttcaggtggaaatgataataggctttttgta
tggaacaaccattcaacacaacctgtgctgaaatactgtgagcatactgctgctgtaaaa
gccattgcgtggtccccccatctccatggtcttctggcttctggtggtggcacagctgat
agatgcattcgattctggaacaccaccactaatacacatctcagttgcatggacactggt
agtcaggtctgcaatcttgtgtggtctaagaatgtcaatgaattagtcagcacacatggt
tactctcaaaaccaaataatagtttggagatatccgacaatgtctaagatagctacactg
acaggccatacatatagagtcttatatcttgctatctctccagatggacagacaattgta
actggagcaggagatgaaacacttagattctggaatgtttttccttctcctaaatctaag
aacaccgagactgaaattggcgcatcttcgcttggtagaactcatatcagatga
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