Nicotiana attenuata (coyote tobacco): 109235765
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Entry
109235765 CDS
T05870
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109235765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109235765
03110 Chaperones and folding catalysts [BR:
nau03110
]
109235765
03029 Mitochondrial biogenesis [BR:
nau03029
]
109235765
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109235765
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109235765
Messenger RNA biogenesis [BR:
nau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109235765
Chaperones and folding catalysts [BR:
nau03110
]
Heat shock proteins
HSP60 / Chaperonin
109235765
Mitochondrial biogenesis [BR:
nau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109235765
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109235765
Exosomal proteins of other body fluids (saliva and urine)
109235765
Exosomal proteins of breast cancer cells
109235765
Exosomal proteins of colorectal cancer cells
109235765
Exosomal proteins of bladder cancer cells
109235765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
109235765
NCBI-ProteinID:
XP_019257550
UniProt:
A0A1J6IMW5
LinkDB
All DBs
Position
12:complement(51749318..51754961)
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFAANLASKARVARTSTQQIGGRLNWSRNYAAKDIRFGVEARAMMLQGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSVEFKDKIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMERVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLILIHEKKISSVNAVVKALELALKRQRPLLIVAEDVDSEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAILTGGQVVTEELGLNIENVELDMLGSCKKVAISKDD
TVILDGAGEKKSIEERCEQIRSTIELSTSDYDKEKLQERLAKISGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELDKLETANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDDTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPKDEKETPAMGGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaatcttgcttccaaagccagagttgcaagaaccagcacccag
cagattggtggaaggttaaattggagtagaaattatgctgcaaaggacattagatttgga
gttgaagctcgggctatgatgcttcaaggggttgaggaacttgctgatgctgttaaagtc
actatgggtccaaagggacgtaatgtggtgattgaacaaagttggggtgcacccaaagta
acaaaagatggtgtcactgtcgcaaaaagtgttgagttcaaggacaaaataaaaaatgtt
ggtgcaagcctcgtaaaacaagttgccaatgccacaaatgatgttgctggtgatggtacc
acgtgtgctacagtcctcacccgagcaatatttgctgaaggatgcaagtcagtggcagct
ggtatgaatgcaatggaccttagacggggtatcaccatggccgtagattccgttgtaaca
aacctgaaaagcagagcacggatgatcagcacatcagaggaaattgcacaggttgggact
atctctgcaaatggagaaagagaaattggtgagctaattgcaaaggctatggagagagta
ggcaaggagggagtcatcactattcaagatggaaagacactgttcaatgagttggaggtt
gttgaagggatgaagctggacagaggttacatttcaccatacttcatcacaaatcagaag
aatcagaaatgtgaactcgatgatccactaattcttattcatgagaaaaagatctcaagc
gttaatgctgtcgtgaaagcattagagttggctctgaagaggcaaaggcccctcttaatt
gtggctgaagatgtggacagtgaagcacttgccactcttattttgaacaagcttcgtgct
ggaatcaaagtttgtgccattaaagcaccgggctttggtgaaaacaggaaagctaatttg
caagatcttgctattttgactggaggccaagttgtaacagaagagcttggattgaacatt
gaaaatgtggagttggatatgctgggatcatgtaaaaaggtggctatttccaaggatgat
actgtcattcttgatggcgctggtgagaagaagtccatagaggagcgatgtgaacagatt
agatcaaccattgaactcagcacatctgattatgacaaggagaagttgcaggaaagacta
gctaagatttcaggaggtgttgctgtgttaaagatcggaggagctagtgaagctgaggtt
ggcgaaaagaaagatagagtcaccgatgctttgaatgccacaaaggctgccgtcgaggaa
ggaattgttccaggtggtggtgttgctcttctttatgcagcaaaggaattggataaatta
gaaactgccaactttgaccagaaaattggtgtacagattattcagaatgctcttaagaca
cctgtacatacaatagcttcaaatgcaggagtagagggtgcagtcgtggttggtaaactg
ttggagcaggatgacactgatcttggatatgatgctgccaaaggtgaatatgtggatatg
gtcaaggcaggaatcattgacccgttgaaagtgatcaggacagccttggtcgatgctgcc
agcgtgtcatctctcttgaccacgaccgaagcagttgttgtcgagcttcctaaggatgag
aaagaaactccagcaatgggtggtggcatgggtggcatggactactaa
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