Nicotiana attenuata (coyote tobacco): 109235811
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Entry
109235811 CDS
T05870
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109235811
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109235811
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109235811
NCBI-ProteinID:
XP_019257608
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Position
12:2233214..2234536
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AA seq
210 aa
AA seq
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MVRSSPEHVGERSASDSDAISVFGSSNVWIDHCYLARATDGLLDVIHASTAVTISNSYFT
EHDKVMLLGHNDEYTADRSMKVTVAFNHFGRELVQRMPRVVSTTRTRRGSSPKVSIKEQG
LPLLELASSTSVSLYLLFYADDLIVIVFSSLATNQFVERLDNRFSFKTVMLEAKAVSTPI
SVTHNLGLADSSYYTVPAQYRALLGFLRYL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtagtagtccagaacatgttggtgaaagatcagcctctgatagtgatgcgata
agtgtgtttggatcatcgaatgtttggattgatcattgttatcttgctcgtgcaacagat
ggtctactcgatgttattcatgcttcaactgcagtaactatatcgaacagttacttcact
gagcatgacaaagttatgttgttggggcacaatgatgaatatactgcagacagaagcatg
aaagtcacggtagctttcaaccattttggccgtgaactagttcaaagaatgccaagggtt
gtgtcaacaacacgtacaagacgcggctcgtcaccaaaggtttccatcaaagaacagggc
ttgccattgttagaattggcctcttcaacaagtgtctcattgtatttactattttatgct
gatgacttgattgttattgttttttcttctcttgccactaatcaatttgttgagcgtctt
gacaataggttttcctttaagaccgtgatgcttgaagccaaggcagtttcaaccccaatt
tcagtcactcataacttaggccttgctgatagctcctactatactgttccggcacagtat
cgagcacttcttggcttcctccgatatctttaa
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