Nicotiana attenuata (coyote tobacco): 109236254
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Entry
109236254 CDS
T05870
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109236254
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109236254
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109236254
NCBI-ProteinID:
XP_019257994
UniProt:
A0A1J6HTX5
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Position
12:complement(44982468..44984403)
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AA seq
394 aa
AA seq
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MLNKMSPLAIFSLLFFFLFHLSSAANTMYNVKNFGAKSNGKTDSSKAFLSAWAAACASTS
AATIYVPRGSYLLRTAYFYGQTCKSKAITIRIDGTLLAPSDYNVIGNAGNWIKFEKVNGV
SIYGGTFDGQGDGLWACKNSGKNCPEGTTALAFYNSNNIIINGVIAQNSQMFHILIDGCK
NVKLQGVKVSAPGNSPNTDGIHVQLSTGVSIMNSHIGTGDDCISIGPGNSNLWMEGIACG
PGHGISIGSLGWKLQEPGVQNVTIKSVTFTGTENGVIVKTWARPSNGFVKGVLFQHIVMT
DVQNPIIIDQNYCPNHESCPHQGSGVKISDVTYQDIHGTSATEVGVKFDCSKVNPCSGIT
LENVNLSYKDRTAEASCVNVGGRVSGSEAPRSCL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacaaaatgagtcctttagcaattttctcacttctctttttcttccttttccac
ttatcatcagcagcaaatactatgtacaatgtcaaaaactttggagcaaaatccaatgga
aaaactgattcatcaaaagcatttctaagtgcatgggctgcagcctgtgcatctactagc
gcagccactatttacgtgccacgtggaagttacttgcttcgcactgcatacttctatggc
caaacatgcaagagcaaggctattactatacgtattgatggcactctcttagctccctct
gattataatgtaattggaaatgctggaaattggatcaaattcgaaaaagttaacggagtt
tccatctatggtggaacctttgatggtcaaggtgatggcctttgggcttgcaaaaactcc
ggcaagaattgtcccgaaggcaccacggcattggccttttacaactcaaacaacatcata
atcaatggagtaatagcacaaaatagccaaatgtttcacattttgatagatggatgcaaa
aacgtgaaactacaaggagtaaaggtctcagctccaggaaacagccctaacaccgacgga
attcacgtgcaattatcgacaggagttagcattatgaactctcatattggtactggagat
gattgtatctcaattggccctggaaattctaacttatggatggaaggcattgcttgtggc
cctggtcatggaatcagcattggaagcttaggttggaaattacaagagccaggagtccaa
aatgtgacaataaagagtgttaccttcactggaacagagaatggtgtgatagtgaaaact
tgggcaaggcctagcaatggatttgttaaaggtgttctatttcaacatatagttatgact
gatgttcaaaatcctattatcatagaccaaaattactgccctaatcatgaaagttgtcct
catcagggatcaggcgtgaagataagtgatgtaacgtatcaagacatacatggaacatcg
gctacagaagttggagtgaaatttgattgtagcaaagtgaatccatgtagtggaataaca
cttgaaaatgtgaatctaagttacaaagatcgtacagctgaagcttcatgtgttaatgtt
ggaggaagagtttctggttcagaagcacctagaagttgtttataa
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