Nicotiana attenuata (coyote tobacco): 109236257
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Entry
109236257 CDS
T05870
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109236257
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109236257
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
109236257
NCBI-ProteinID:
XP_019257996
UniProt:
A0A1J6IEZ6
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Position
12:complement(45028334..45030812)
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AA seq
395 aa
AA seq
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MKMENPIFSLLLISLLSIFFTKTIADVVTLNVLNFGAKPDGKTDSTKALLTAWAAACDSL
KPATIFVPQGKYLVTQAHFKGKCKNRAIMFKIDGILIAPSDYNVIGNSKNWLLFQGVDGV
SIHGGILDGQGNGLWACKASGKNCPTGATTLGFSNSNNIAITGLTSLNSQMFHIVFNGCK
NVKLLAVKVFASGKSPNTDGIHVQLSSDISILNSKISTGDDCISIGPGTSNLWIQNMACG
PGHGISIGSLGKDFQEAGVQNVTVKSVIFKNTQNGVRIKTWGRPSTGFVKNVLFQHATMI
NVQNPIVIDQNYCPYNKNCPGQVSGVTISDVTYQDIHGSSATRVAMKFDCSKRNPCRGIK
LEDVHLTYQNQPAAQASCANAAGTTYGVIQPTSCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagaaccccattttttctcttcttcttatttcacttctctccattttcttc
actaaaaccatagctgatgttgtaacattaaatgttctaaattttggtgcaaaaccagat
ggaaaaactgactcaacaaaggctttgttaactgcttgggcagcagcttgtgactcttta
aaaccagccactatatttgtcccacaaggaaagtatttggttacacaagcacattttaaa
ggaaaatgcaagaatagagcaataatgttcaaaatagatggcatacttattgcaccctct
gattataatgtgattggaaattccaaaaattggcttttatttcaaggtgttgatggagtt
tccattcatggagggattcttgatggccaagggaatggtttatgggcttgcaaggcctcc
ggcaagaactgcccgaccggcgctactactctgggattttccaactcaaataatatagca
ataacaggactaacttcattgaacagccaaatgtttcacattgtcttcaatgggtgcaaa
aatgtgaagttgctggctgtcaaagtttttgcctctggcaaaagcccgaatactgatggt
attcacgttcaattatcctctgacatctcgattttgaactcgaaaatcagtactggagat
gattgcatctccattggtcctggaacttctaatctgtggattcaaaacatggcttgtggc
cctggccatggaatcagcattgggagtttaggcaaggattttcaagaagcaggagtgcaa
aatgtgacagtcaaatcagttatatttaagaacacacaaaatggtgtgaggattaaaaca
tggggcagaccaagtactggctttgtaaagaatgttcttttccaacatgctacaatgatt
aacgttcaaaatccaattgttattgatcagaattactgtccatataacaaaaattgtcct
ggacaggtgtcaggtgtgacaattagtgatgttacatatcaagatatacatggaagttca
gcaacacgagtcgcgatgaaatttgattgcagtaaaagaaatccatgccgaggaataaaa
ttggaagatgtacatctcacttatcagaatcaaccagccgctcaagcttcttgtgctaat
gctgcaggaacaacttatggtgtaattcagccaacaagttgtttataa
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