Nicotiana attenuata (coyote tobacco): 109236507
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Entry
109236507 CDS
T05870
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109236507
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109236507
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
109236507
NCBI-ProteinID:
XP_019258243
UniProt:
A0A314LJ78
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MAKLLISWCCVYFFSFGFIFLKSNAASVTYNVLSFGAKSDGKSDATQPFLKAWVAACSSM
KSATIYVPRGQYLIKAATFRGPCKSKITVKIDGTLVAPADYRAVGNSGYWILFIQVSRIS
VVGGTLDGNGAGFWACRKSGKNCPVGARSITFNWANDVVIKGLTSVNSQLMHLVINSCKN
VMVKNVRIIAPELSPNTDGIHVQSSTGVTITGTSIKTGDDCISIGPGTTNLWMEKIQCGP
GHGVSIGSLARDYKEDGVQNVTLINSVFSGSDNGLRIKSWARPSTGFVTNINYQNIIMRN
VDNPIIIDQNYCPNNQGCPGQTSGVKINQVTYKNILGTSATKVAMNFDCSPSNPCSGIKL
QDIKLTYLNGKAQSICKNIRGNTGGIILPFNCLY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcttttaatttcttggtgttgtgtctacttcttttcttttggattcattttc
ttgaaatcaaatgcagcatcagtaacatacaatgtgttaagctttggagcaaaatcagac
ggcaaaagtgatgcaactcagccatttctgaaagcatgggttgctgcatgcagctcaatg
aagtcagccaccatttacgttcctcgtggacagtacttgattaaggcagcaactttcaga
gggccatgcaaaagtaaaatcactgtaaaaatcgatggaactcttgtggctccggctgat
tatcgcgccgttggaaactccggctactggattttgtttattcaggttagccggatttcg
gtcgtcggaggaactcttgatggaaatggagctggattttgggcttgccgcaagtcaggg
aagaattgtcctgttggagctaggtctataacgttcaactgggcaaatgatgttgtgatt
aaaggcttaacatcggtcaatagccagctaatgcacttggtgataaatagctgcaagaat
gtgatggttaaaaatgtaagaataatagcaccagagttaagtcccaatactgatggcatt
catgtccaatcttcaactggtgttactatcactggtacaagtatcaaaactggagatgat
tgtatatctattggccctggtaccacaaacctttggatggagaagattcaatgtggccct
ggacatggtgttagcattggaagtctagcaagagattacaaagaagatggtgtgcagaac
gtgacattaattaattcagtattttctggatctgataatggattaaggataaagtcttgg
gcaagacccagcactggttttgtcaccaacattaattatcaaaacattatcatgaggaat
gttgacaatccaatcatcattgatcaaaactactgtcccaacaaccaagggtgtccaggc
cagacttctggtgtaaagatcaatcaagtgacatacaaaaatatattaggaacatcagca
acgaaagtagccatgaattttgactgcagtccaagcaatccatgcagtggaataaagtta
caagacataaagcttacttatttaaacggaaaagctcaatctatttgcaagaatattaga
ggaaatactggaggaatcatcttgccttttaattgtttatattaa
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