Nicotiana attenuata (coyote tobacco): 109236633
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Entry
109236633 CDS
T05870
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109236633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109236633
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109236633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
PEP5_VPS11_N
WD40_like
Beta-prop_LRRK2
Ge1_WD40
TAF1C_beta-prop
VID27
Cytochrom_D1
Beta-prop_IP5PC_F
VPS8_N
Motif
Other DBs
NCBI-GeneID:
109236633
NCBI-ProteinID:
XP_019258370
UniProt:
A0A314LFS0
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGIFEPFRAIGYITTNVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVGPQLPKKIR
ALASYREYTFAAYGSDIAVVKRAHQVATWSSHSAKVNQLLLFGEHVLSVDVEGNIFIWQF
KGIDKNPAPIGHIKLDDKFSPSCIMHPDTYLNKVMVGSQEGALQLWNISTKKKIYEFKGW
GSSITCCVSSPALDVIAVGCADGKIHVHNIRYDEEVATFSHSTRGAVNALSFSTDGQPLL
ASGGSSGVISIWNLEKRRLHSVVREAHDSSIVSLQFFANEPVLMSSSADNSMKMWIFDTS
GGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSKR
AKKLKVKEEEIKLKPVIAFDVAEIRERDWCNVVTCHMDTPRAYVWRLQNFVLGEHILTPC
PENPTPVKACAISACGNFAVLGTAGGWIERFNLQSGISRGNYIDQLEGKSAAHNGEVIGI
ACDATNTIMISAGYHGDVKVWDFKGRDLKYKWEVGCSLVKIVFHRSNGLLATVADDLIIR
LFDVIAQRMVRKFEGHTDRITDMCFSEDGKWLLTSSMDGTLRIWDVILARQIDAVQVDLS
ITALSLSPNMDILATSHVDQNGVYLWVNQAMFSGAASFASYGSGQEIVNVKMPSVSSAKD
GENNDNKTIVKQSESLDTSQFLYSGHQIPDLVTLSLLPKSQWQSLINLDIIKARNKPIEP
PKKPERAPFFLPSIPSLSGEILFKPSEGANEENNTQNAELEKNSKKTDLPASKFLQILQS
CAEKENFATFTDYIKSLSPSTLDMELRMLQIIDDDDEQEPEKRQELQFIELLVDYFIHEV
SCRNNFEYIQALIRLFLKIHGETIRRQSKLQDKARKLLEVQSAVWQKVEKLFQSARCMVT
FLSNSQF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggatattcgaaccatttagagcaattggatacattacgaccaatgttcccttctct
gtacagagacttggcactgagaccttcgtcaccgtcagcgtcggcaaagctttccaagtt
tacaactgcgctaaactcaatttggtccttgttggtcctcaattgccaaagaagattcga
gctctcgcttcttatcgtgaatatacttttgctgcctatgggagtgatattgcagttgtt
aagcgtgctcatcaggtggctacttggagtagccatagtgctaaggtcaatcagttgctt
ctttttggtgaacacgtcctaagtgttgatgttgaaggcaatatcttcatatggcagttt
aaaggtatagacaagaatcctgctccgatcggacacataaagctagatgataaattctct
cctagctgcataatgcatccagacacttatttaaataaggttatggtaggaagtcaagaa
ggtgctttgcaactctggaatataagcacaaagaagaaaatttatgagttcaagggatgg
ggatcttctattacttgttgtgtttcatctccagcactagatgttattgctgttggatgt
gcggatggaaagattcatgttcataacattcgttatgatgaagaggtagctacatttagc
cactctacaagaggtgctgttaatgccttgtcattcagcactgatgggcagccgcttcta
gcttctggaggctcatctggtgttataagcatatggaatcttgagaagagaaggctgcac
tctgtcgtcagggaggcccatgactcctccatagtttcacttcagttctttgctaatgag
cctgtcctcatgagttcatccgcagacaattcaatgaaaatgtggatcttcgatacaagt
ggtggggaccctcgtttactacggtttagaagtggtcacagtgctcctcctctatgtatc
aagttctacgcaaatggacgtcacatcttgtctgctggtcaagatcgagcgtttcgtctt
ttttctgttgttcaggatcaacaaagtagagaactttcccagcgacatgtgtctaaaaga
gcaaagaagcttaaggtgaaagaggaggagataaaattgaagcctgttattgcatttgat
gttgctgaaatcagggaacgtgattggtgcaatgtggttacatgtcacatggacacccca
cgggcttatgtatggaggcttcagaattttgttctcggtgagcatatcttaactccatgc
cctgaaaatccaactccagtcaaggcctgtgctattagtgcctgtggcaattttgctgta
ctagggactgccggcggttggattgaacgatttaatctgcagtcaggaatcagccgtggc
aattatattgatcagttggaaggtaaaagtgctgctcacaatggggaagtaattggcata
gcttgtgatgcaacaaataccatcatgataagcgctggataccatggtgatgtaaaagtt
tgggacttcaaaggacgtgatttgaaatataaatgggaggttgggtgttccttagttaag
attgtgttccaccgttctaatggtcttttggctactgtggcagatgacttaattatccgt
ctatttgatgttattgcacagaggatggttcgtaaatttgagggtcacactgaccgtatc
actgatatgtgttttagcgaggatgggaaatggcttttgacgtccagtatggatgggact
ctcagaatttgggatgtaattttagctaggcagatagatgcagttcaggttgatctgtct
atcactgcattatctttatcgcctaatatggatatcttggccacatctcatgttgaccaa
aatggcgtctacctgtgggtcaatcaagcgatgttctctggagctgccagctttgcatct
tacggaagtggacaagaaatagtcaatgttaagatgccgtcagtttcttctgcaaaagat
ggtgaaaacaatgataataaaactattgttaagcaatcggagtcccttgatacttcccag
tttttatattcaggtcatcaaattccagatctagtcactctttcactattgcctaagagt
caatggcagagcttgatcaacctggatataataaaggcccgcaacaaacccattgagcct
ccaaagaaacctgaaagagcacctttcttcttgccttcaataccatctctgtccggtgag
atattatttaaaccaagcgaaggtgctaatgaggagaataatacacaaaatgccgaattg
gaaaagaacagtaagaaaactgatcttccagcatccaaattcttgcaaattcttcagtcc
tgcgcggagaaagagaattttgcaacattcactgattatatcaaaagcttgtcgccttca
acattggatatggagctccgaatgcttcagataatagatgacgacgacgagcaggagcct
gagaagagacaagaattgcaatttattgaactgctagtggattactttattcacgaggtt
tcatgcagaaacaattttgagtatatacaggctctgattagattgtttttgaagattcat
ggtgaaacaattcggcgccaatcaaaattgcaggataaggcaagaaagcttttagaagtt
caatctgcagtttggcaaaaagtagagaaattgttccaaagcgccagatgcatggtcaca
tttcttagcaactctcaattttga
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