Nicotiana attenuata (coyote tobacco): 109236741
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Entry
109236741 CDS
T05870
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109236741
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109236741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109236741
NCBI-ProteinID:
XP_019258502
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MGNHHPRYKHHHHHQQGPPFPVPPIPTAQSQNTVSTQMGLVLPYGQVDSSLRALAGQAEG
FGGSSIGGRDGHIYQVINLNDDGPGSLRDGCRKKEPLWIVFEVSGTIELRSYLSVSSYKT
IDGRGQRIKITGKGLRLKECEHVIICNIEFEGGRGPDVDAIQIKPKSRLIWIDRCSLSDY
DDGLIDITRESTDITVSRCHFSKHDKTMLIGGDPSNCTDRCMRVTIHHCFFDGTRQRHPR
VRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTEKAADKEEGCT
GSIKSEDDLFVCGTQAGLLSTCSGNNIFNPSEFYQTWTVERPSDALKHYLQHCTGWQSIP
RPN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccaccatccccgttacaaacaccaccatcaccatcaacaaggccccccattt
cctgtgcctccaatacccacagctcaatcccagaacacagtgagtacccaaatgggtttg
gttttgccttatggtcaagttgactctagcttgcgtgctctagctggtcaagctgagggc
tttggtggttcctccattggtggtcgtgatggtcatatttatcaagttattaatctcaac
gatgatgggccaggatcacttcgagatggatgtcgtaaaaaagaacctctatggatcgtt
tttgaggtttcagggacgattgagctccgatcttatttgagtgtgtcgtcttacaaaact
attgatgggcgaggccagagaatcaaaatcacagggaaaggtttgaggttgaaagaatgt
gaacatgtgatcatctgcaatatagagtttgagggaggcagaggacccgatgttgacgcc
attcagattaaaccaaagtcgaggcttatctggatagatcgttgtagccttagtgactat
gacgatggtttaattgacatcacaagggagagcacagatattactgtttctaggtgtcac
ttttcaaagcatgataagaccatgcttattggaggagatccttctaattgtaccgacaga
tgtatgcgggtcaccattcaccactgcttttttgatggaacaagacagcggcatcctcgt
gttagatttggcaaagtacatttgtacaacaactacaccaggaactggggaatttatgct
gtttgtgcaagtgtagaatcacagatatattcccaatgcaacatatatgaagctggacaa
aaaaaggtggcctttaaatatctcacagagaaggcagctgacaaagaggaaggatgcact
ggtagcattaaatctgaagatgacttgtttgtctgtggaactcaggctggtttattgtct
acttgcagtggaaataacatcttcaatccatccgaattctaccaaacctggactgttgaa
cgtccgagtgatgctctcaaacactaccttcaacactgtacaggatggcagtctatccct
cggccaaattga
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