KEGG   Nicotiana attenuata (coyote tobacco): 109237304
Entry
109237304         CDS       T05870                                 
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
  KO
K12816  pre-mRNA-processing factor 17
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109237304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nau03041]
    109237304
Spliceosome [BR:nau03041]
 Complex C
  Other components
   Step II factors
    109237304
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 109237304
NCBI-ProteinID: XP_019259145
UniProt: A0A314LE69
LinkDB
Position
Unknown
AA seq 587 aa
MDLLQSYADDETAESPPQNPNSQTSDQSPSPDSSPIRMLPSKSAAPKVDDTMLTLTVAGE
AARAQSKPLDPTQHLVGFNPTYEQLWAPIYGPAHPYAKDGLAQGLRNHKLGFVENAAIEP
FVFDEQYNTFQKYGYAVDPSENSYIGDLDKMKECDAISVYNIPQHEQKKRKLEKKKEKME
EEGDEGDVDMSEVENPATDTWLMKNRKSPWAGKKEGLQVELTEEQKKYAEEYAKKKGEER
GGGEKPEPLLEKSTFHGKEEKDYQGRSWIAPPKDAKAANDHCFIPKRLVHTWSGHTKGVS
AIRFFPKHGHLILSAGMDTKVKIWDVYNSGKCMRTYMGHSKAVRDIWFCNDGSKFLTAGY
DKYIKYWDTETGQVIQTFTTGKIPYVVRLNPDEDKQNVLLAGMSDKKIVQWDINSGQITQ
EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISPHPN
GNWIAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVLSGDGEGRC
WFWDWKSCKVFRTLKCHDGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggatctcttacagtcctacgccgacgatgaaaccgccgaatcgccgccacaaaaccct
aattcccaaacctccgaccaaagcccttcgccagattcatccccaatccgcatgctccct
tcaaaatccgccgcccccaaagtcgacgacacgatgctaaccctaacagtcgccggtgaa
gctgccagagctcaatccaaacccctcgatccgacccaacacctcgtcggattcaacccg
acatacgagcaactctgggcaccaatctacgggccagctcacccctacgccaaggacggt
ttagctcaagggctccgaaatcacaagctagggtttgtcgaaaacgccgctattgaacct
tttgtattcgacgagcagtacaacacttttcagaaatacgggtacgctgttgatccctct
gaaaatagttacattggtgatttggataaaatgaaggaatgtgatgcaatttctgtgtat
aatatacctcagcatgaacaaaaaaagaggaaattagagaaaaagaaggaaaaaatggag
gaggagggtgatgagggtgacgtggacatgtcggaagttgagaatccggcgaccgacacg
tggctgatgaagaacaggaagagtccatgggctggaaagaaagaaggattacaagtagaa
ttaactgaggagcagaaaaagtatgctgaagagtatgctaagaagaagggtgaagaaaga
ggtggtggagaaaagcctgagcctttacttgaaaagagtacattccatggtaaagaggaa
aaagattatcagggtaggtcgtggatcgctcctcctaaggatgcaaaggctgcgaatgat
cattgttttataccaaaacgattggttcatacttggagtgggcacaccaaaggggtttcg
gctattaggtttttccctaagcatggtcatttgattttgtcagctgggatggatacaaag
gtgaagatttgggatgtttacaattctggtaaatgtatgaggacttatatgggacattca
aaggcggtgagggatatttggttttgcaatgatgggtcgaagtttttgacagctgggtat
gataagtatattaagtattgggatacagaaacaggacaggtgatccaaacgttcaccaca
gggaagataccctatgtggtgaggcttaaccctgatgaggataagcagaatgtacttttg
gctggtatgagtgataagaagattgtgcagtgggacataaatagtggacagattacacaa
gagtatgatcaacatctgggggcagttaatacaattacctttgtggataataataggagg
tttgtgacctctagtgatgataaatcactccgtgtttgggaatatggtattccggttgtt
attaagtatattagtgaaccccatatgcattccatgccatctatttcgccccatccgaat
gggaattggattgcagctcaaagtttggataaccagattcttatttatagtacgcgagag
agatttcagctgaataaaaagaaaagatttgctggacacattgtcgctggttatgcttgc
caggtcaacttttcacctgatggacggtttgtcttatcaggagatggtgaaggcagatgc
tggttttgggattggaaatcgtgtaaggtcttcagaactctcaagtgtcatgacggggtc
tgtattggtgcagagtggcatcctctggaacaaagtaaagttgctacttgtggttgggat
ggtttgatcaagtactgggactag

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