Nicotiana attenuata (coyote tobacco): 109237411
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Entry
109237411 CDS
T05870
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03420
Nucleotide excision repair
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109237411
09124 Replication and repair
03420 Nucleotide excision repair
109237411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nau03051
]
109237411
03400 DNA repair and recombination proteins [BR:
nau03400
]
109237411
Proteasome [BR:
nau03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109237411
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109237411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
CUE
UBA_RAD5A
TECR_N
UBA_3
Ubiquitin_4
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
109237411
NCBI-ProteinID:
XP_019259261
UniProt:
A0A314LE94
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDTVADVKRNIESVQGQDVYPAAQQMLIHQGKVLKDTTTLE
ENKVAENSFVVIMLSKNKASSTGTSSSPAAPSDTAQPAISTGQAQARQTITAPQAPVASA
APPQSASESAPAPVPGDASTVTDVYDQAASNLVAGSKLEATVQHILDMGGGSWDRDTVVR
ALRAAYNNPERAVDYLYSGIPEQAEIPPFAPTAAAIASGQAVNPSAQEASQPAVPSSGPN
ANPLDLFPQGLPNVGSNAGSGNLDFLRNSPQFQALRTMVQANPQILQPMLQELGKQNPHL
MRLIQEHQPDFLRLINEPVEGEGNALGQMAGAIPQAVTVTPEEREAIERLEAMGFDRALV
LEVYFACNKNEELAANYLLDHMHEFDE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtgaagactttgaaaggcactcactttgagatcgaagtgaaaccggaa
gacaccgttgcggatgtgaagagaaacatagaatcagttcagggacaagatgtctaccct
gctgcacaacagatgcttattcatcagggtaaagttctcaaggacactacaacgctcgag
gaaaacaaagttgctgaaaatagtttcgtggtcattatgctttccaagaataaggcctca
tcaactggaacctcatcttctccggcagctccttcagatacggcacaaccagctatttcc
actgggcaagcccaagctagacagacaataacagcacctcaagctcccgttgcaagtgct
gcacctccacaatctgcttctgagtctgctcctgcccctgtgcctggtgatgctagtact
gtaacagatgtgtatgatcaagcagcatcaaaccttgttgctggaagtaagttggaggcc
acagttcaacacattcttgatatgggtggtggaagttgggatagggatacagttgtgcgt
gctttacgtgcagcatataacaatccagagagagctgttgactacttgtattctggtatt
cctgaacaagccgaaattccgccttttgcccctacagccgctgctattgccagtggacag
gctgtaaacccttcagcgcaagaggcttcacaacccgcagttccttcaagtgggccaaat
gctaatcctttggatctgtttcctcagggtctaccaaatgtgggctcaaatgccggttct
ggaaatttggattttctacgcaatagtccacagtttcaggcccttcgaacaatggttcaa
gccaatccacaaatcttgcagcctatgctccaggagttgggtaagcaaaatccgcatttg
atgcggcttattcaagagcatcaacccgactttctgcgcctcatcaatgaacctgttgaa
ggggaggggaatgcgctagggcagatggcaggagcaataccacaagcggtgactgttaca
cctgaagagcgtgaggctattgaacgtcttgaagctatggggtttgatcgagctttagta
ttggaagtatactttgcgtgcaacaaaaatgaggagctggctgcaaactatctattagat
cacatgcatgagtttgacgaatga
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integrated database retrieval system
