Nicotiana attenuata (coyote tobacco): 109237452
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Entry
109237452 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109237452 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nau03400
]
109237452
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109237452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
109237452
NCBI-ProteinID:
XP_019259304
LinkDB
All DBs
Position
Unknown
AA seq
2515 aa
AA seq
DB search
MEDKDTELLCKVSANHLFLAQFEPFRATLRNLRARNPELSRAILQTIVAHGGRLDSIIWS
RSCPSPALLTFLCTLELLHFNEPTSQLWSFDAATLKLRAEFCLYLQTVISRVSQSISSSN
LDEEAVENVDLNGDALGINEDLKGLSESLRVLVKIADVGLRRLRPDLIEMDDTVESEGNS
GGDIIVEEEEMTCLRKLLLENADIFDVLSLNIEKQVGWVENEDSGMAITVRTVVKHKEVE
DRVLKSLQKSIQIAHLDAMRDCLMNNDVDGAVSHIRFLHLDYGVDEEEYRTVSRDLLRRV
LPGKDDYGDAWFEMRDKFLSVYGEALSSRCTPLVKMIQVIHDEMLLEEIESLKASESEQI
PLPLQRLKVFVRELNSETTLNNTNSLLETVITSCMREMYHYARVRGLHVLECIMDTALSA
VRKEELQEASDILLLLPRLQPLVAVLGWDLLSGKTGLRRKLMQLLWTSKSQALRLEDSPH
YGNRSNEVSCIEHLCDLLCYQLDLASFVACVNSGKSWSLKSSLLLSGKEFMQQGNEDVQW
DPFVENFVLERLSVQSPLRVLFDVVPSIKFQDAIELISMQPITSNLAAWRRMEDIELMHM
RYALESAVLALGEMEKNIGEGVGNGQFNFCYLKDLKNHLDAINNIFRKILMVNIIISLLH
MDGLSLNLTPCASSSSSSESSNISREQQLEDATHDGQNKTVVMFIGQLLDILRQYLPSSN
SEKENNGEVNMSAGIKEAIEWRIMNAKRFIEDWEWRLSILQCLLPFSERQWRWREALTIL
RAAPSKLLNLCMQRAKYDIGEEAVNRFSLPPEDKATLELAEWVDSAFGRASVEDAVSRAA
DGTSPIQELDFSSLRAQLGPLPAILLCVDIAATSAKSSNISWKLLSQAQVMLSEIYPGNS
PKIGSTYWDQIREVAMISVIKRVLKRLQEQLEQDKPPALQDILTGEMILLSSKDFHRQGH
KERALAMLHQMIEDAHMGKRQFLSGKLHNLARALADEETEREQVKEDGSRSDRKGLLLYS
RNGVIGLGLKTLKQLPITSAAGDNNIPSGGYDVKETGTRLFGTFSSRMTTFLSQFILYLA
AIGDIVDGTDTTHDFNYFSLVYEWPKDLLTRLVFEQGNTDAAEKAAEIMNADFVHEVISA
CVPPVYPPKYGHGWACIPVIPTYNENYSENRVISPSCREAKPGSFTPSSGDVELPLYPLQ
LDIVKHLIKLSPVRAVLACVFGSSILYRGRDTTVSRSLKSCSLQTPDADRLFFEFALDQS
ERFPTLNRWIQMQTNLHRVSEFAIMADHTTRDGKDVPECKTAMKRFRDHDSDAESEVDEL
AGSNNISTNAQEIKKEVGGSSDPWRDSLKSGSSDCTTVFLSFDCENEGPYEKAVERLIDE
GKLMDALAISDRFLQIGASDRLLQLLIERGEENILSGQSQGYSGNRNWSHSWQYCLRLKD
KRLAARLALKYLHRWELDAALDVLTMCSCHLLGNDPIKDNVVQMRQALQRYSHILSADNR
FHSWLEVESECKEDPEGLALRLAEKGAVSAALEVAESEGLSIELRRELQGRQLVKLLTAD
PLNGGGPAEASRFLSSLRDTADALPVAMSAMQLLPNLRSKQLLVHFFLKRRDNNLSESEV
SRLNSWALGLRVLAALPLPLQQKCSPLHEHPHLILEVLLMRKQLQSASLILKEFPSLRDN
NMILIYAAKAIAVSISAPSRDPRISISTPRARQKTKMGTPTRSSFTSSLSNFQKEARRAF
SWVQTGDKGASKDTHRKRKSSGVMQSERVAWEPTTAIQEDRVTLFSADGQERLPAVAIAE
MWMLTGDPKKDEAVRSSHRYESTPDITLFKALLSMCSDESASAKGALDLCVGQMKSVLSS
LQLPENATMETIGRAYHATETFVQGLLFAKSLLRKLSGGTDLLSSSERSKDADDASSDAG
SSSVGSQSTDELSEVLAQAETWLGRAELLQSLLGSGIAASLDDIADKESSERLRNRLILD
ERYSMAVYTCKKCKIDVFPVWNAWGHALIRMERYAQARVKFKQALQLYKGDAATVIMEII
GTIEGGPPVDVSSVRSMYEHLARSAPAILDDSLSADSYLNVLYMPSTFPRSERSRRSQEA
LNDSSSNNTYFEDGPKSNLDSVRYLECINYFQEYARQHLLDFMFRHGHYKDACLLFFPPN
SVPPPPQPSSGVVTSSSSPQRQDPLATDYGTLDLLCDLCTAYGAMPVLEEVLSERTSNIT
SQDPSVNKHTTAALSRICNYCETHKHFNYLYKFQVTKKDHVAAGLCCIQLFMNSSSQEEA
IRHLENAKMHFEEGLSARHKAGESTKLITKGIRGKSASEKLTEEGLVKFSARVAIQIDVV
KCFNDAEGPQWKHSLFGNPNDPETFRRRCEIAETLAERNFDLAFQVIHGFNLPAVDIYAG
VAASLAERKRGSQLTEFFRNIKGTIGDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSH
RKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7548 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaagacacagagctgctgtgtaaagtcagcgcgaaccatcttttcttagct
caattcgagccattccgagccactctgcggaatcttcgtgctcggaatcctgaactctct
cgagcaattcttcaaacaattgttgcacatggcggaagattagattcgattatctggtcc
cgctcttgcccttctcctgcactcctcactttcctctgcacccttgagctcctccatttt
aatgaacctacttcccaactttggtcttttgatgccgctactcttaaattaagggctgaa
ttctgtttgtacttacaaactgtgatttcaagggtttcacaaagcatctcgagttcgaat
ttggacgaagaagctgttgaaaatgtggatttaaatggagatgctttgggtattaatgaa
gatttgaagggtttaagtgaaagtttgagggttttggtgaaaattgctgatgttggtttg
aggcgcttgaggccggatttgattgaaatggatgacacggtagaaagtgagggaaattca
gggggagatattatagtggaggaagaggaaatgacgtgcttgaggaagctattattggaa
aatgcagatatctttgatgttttgtctctaaatatagagaaacaagttggttgggttgag
aatgaggattcgggtatggcaatcacagtcaggacggtagtgaagcataaggaggttgag
gatagggtgcttaaatcactgcaaaagtccattcaaattgcacatttggatgctatgagg
gactgcctaatgaataatgatgtggatggagctgtttcgcatattcgttttctacatttg
gattatggggtcgatgaggaggaatatcgcactgtctcaagagatctactcaggagggtg
ttacctggaaaggacgattatggagatgcctggttcgagatgcgagacaaattcttatca
gtttatggggaagcactttcatctcgttgtacacctcttgttaagatgatacaggtgatt
cacgatgaaatgctcttggaagagattgagagtctcaaagcttctgaaagtgagcagatt
cctcttcctcttcagcgtctcaaagtttttgtccgagaactgaattctgagacgacttta
aacaacacaaattcgttgctggagactgttattacttcttgcatgagagaaatgtaccat
tatgctcgtgttcgtggcttgcatgtactggaatgtatcatggatactgccctgtctgct
gtgagaaaggaggaactgcaagaagccagtgatattcttttgctgttgccccgacttcag
cctcttgtagcagtcctcggttgggaccttttgtctggtaaaacgggtttaagaaggaaa
ttgatgcagcttctgtggacaagtaaatcacaagctcttcgcctggaagactctccacat
tatggaaatagatcaaatgaggtgtcttgcatcgaacatctctgtgatctcctgtgttat
cagcttgatcttgcttcttttgtagcatgcgtgaattctggcaagtcatggagtttgaag
tcctcgctactgttgtctggtaaagagtttatgcaacaaggaaatgaagatgtgcaatgg
gatccctttgttgaaaattttgtgctggaaagattatctgtacagagtcctttgcgggtg
ttatttgatgtggttccaagcattaagtttcaagatgctattgaactgattagcatgcag
ccaattacttccaatctagcagcctggaggaggatggaggacattgaactcatgcacatg
cgttatgctttggaatctgctgtccttgcacttggagagatggaaaagaatatcggtgag
ggagtaggaaatggccagttcaatttttgctacctgaaagatctgaagaaccatcttgat
gccatcaacaacattttccgcaagatactgatggtgaacattatcatctctcttctgcat
atggatggcctttctctcaatttgacaccttgtgcttcatcaagcagctcatctgaatca
tccaatatatcgagggagcaacaattggaggatgcaactcatgatgggcaaaataagacc
gttgtaatgtttatagggcaactattagatatattgcggcaatatctaccatcttcaaac
tcagagaaggagaataatggggaagtaaatatgtctgctggtatcaaagaagccatagaa
tggagaattatgaatgccaaaagatttattgaggattgggaatggcgtttgtcaattttg
cagtgccttctcccattctctgaaagacagtggagatggagggaggctcttacgatatta
cgtgcagccccatccaaactgctaaacctctgtatgcaaagggcaaagtatgatattgga
gaagaggctgtcaaccgtttctctttgcctccagaagacaaagctacactagagctggct
gaatgggtagatagcgcctttggaagagcatctgttgaagatgctgtttcccgtgctgct
gatgggacttccccgattcaagaactggatttctcgtctttacgtgctcagttaggtcct
ctaccagctattctcctgtgcgttgatatagctgcaacttctgcaaaatcttcaaacata
tcctggaagctgttaagtcaggctcaagttatgttgtcagagatttaccctggtaattcc
cctaaaattgggtcaacctactgggatcagattcgtgaagtggcaatgatatctgtaatc
aagcgcgttcttaagcgtctacaggaacaactggaacaggataagcctccagctcttcaa
gacattttaactggagaaatgatccttttgtcctcgaaggattttcaccggcaaggccat
aaggagcgtgcactagccatgctgcatcaaatgattgaagatgctcatatggggaagaga
cagtttcttagcggtaagctccacaatttggcaagagctttagcagatgaagaaacagag
agggaacaggttaaggaggatggctcacgttctgacaggaaaggattgttactgtacagc
agaaatggtgttattgggcttgggttgaaaaccttgaagcagcttccgataacttcagca
gctggtgacaacaatataccttctggtggctatgatgtcaaggaaactggaacgagatta
ttcgggacgttcagctccagaatgaccacatttctatcacaatttattctctaccttgct
gccattggggacattgtagatgggactgataccactcatgacttcaactacttctcacta
gtgtatgaatggcctaaagaccttttaactcgtctagtgtttgagcaaggcaataccgat
gcagctgaaaaggcagcagaaattatgaatgctgattttgttcatgaagtgatttctgct
tgtgtgcctccagtttatcctccaaaatatggtcatggttgggcgtgcatcccagttatt
cctacatacaatgagaattactctgaaaatagagtaatatccccttcatgcagagaagcc
aagcctggatctttcaccccttcctcaggggatgttgaattacctctttatcctctccaa
ttggatatagtgaagcatctcatcaaattatccccagttagagctgtattagcgtgtgtc
tttggaagttctatactttatcgtggcagggatactactgtatctagatctctgaaaagt
tgctcgttacaaactcctgatgctgataggttattctttgagttcgctcttgaccaatct
gagaggttccctaccctgaatcgctggatacagatgcagaccaatcttcatcgagtctca
gaatttgcgataatggctgatcacacaacgagggatggcaaagatgtacctgaatgcaaa
actgctatgaagcgatttcgtgatcatgatagtgatgctgaatctgaagttgatgaactt
gctggtagcaataatatatcaacaaatgcccaggagatcaagaaagaagtgggaggatct
tctgatccttggcgcgattccctaaaatccggaagttctgattgtactacagtttttctt
tcttttgattgcgagaatgaaggcccatatgagaaagctgtggaacggttgattgatgaa
ggaaaattgatggatgctcttgccatttctgatcgtttcttgcaaattggagcctcagat
cggttgcttcagttactaattgaacgcggagaggaaaatatattgtctggacagtctcaa
ggttactcaggcaaccgtaattggagccatagctggcagtactgtctgcgtttgaaggat
aaacgactggcagctagacttgcactcaaatatttgcatagatgggaactggatgctgct
ttggatgttctcactatgtgcagctgccacttgcttggaaatgatcctattaaagataat
gttgttcagatgagacaagctctccagaggtacagccatatattaagtgcagataaccgc
ttccacagctggctagaggtggagtccgagtgtaaagaagatcctgagggtcttgccctt
agactagctgagaagggagctgtttctgctgctttagaggtggctgaaagtgaagggcta
tctattgaactgcgcagagagctgcaggggcgtcaacttgtgaagcttcttacagcagat
cctttaaacggtggaggccctgcagaagcttcacgttttctttcttctttacgtgacact
gcagatgctttacctgttgcaatgagtgcaatgcagcttttgcccaacctacgatcaaaa
cagcttcttgttcactttttcctgaaaagaagggataataatttatcagagtcggaagtt
tccaggctcaactcctgggctttagggttacgtgttctggctgctttgccattaccattg
cagcaaaaatgctctcccctacacgagcaccctcatttgattctagaagttttgctgatg
agaaaacaacttcaatctgcatccctgatacttaaggaattcccctccctgagagacaac
aatatgattcttatatatgctgccaaagctatcgctgtcagcattagtgctccttccagg
gatccgaggatttcaatttcgactccaagagcaagacagaagacaaaaatgggaacacct
acaaggtcatcattcactagtagccttagtaattttcaaaaagaggcccgcagagcattt
tcttgggtccaaactggagataaaggtgcatcaaaggatacacataggaagagaaagagc
tctggtgtaatgcaatctgagagagtggcgtgggagccaactactgccattcaggaagac
cgtgttacactattttctgcagatgggcaagaacggctgcctgctgttgctattgctgag
atgtggatgctcacaggtgacccaaagaaggatgaagctgtgcgttcatcgcatcgatat
gaaagtaccccggatattactcttttcaaggcactgctttcaatgtgttcggatgagagt
gcatctgccaaaggtgccttggacttgtgtgttggacagatgaaaagtgtattaagctcc
ctacagttacctgagaatgcaacaatggaaactattggccgagcatatcatgccacagaa
acttttgttcagggcctgcttttcgcgaaatccctccttagaaagctttctgggggcact
gacttgttaagtagttcagaaagaagtaaggatgctgatgatgcatcttctgatgctgga
agctctagtgtgggtagtcagtcgactgatgagctgtctgaagtactggcacaagctgag
acgtggctaggacgtgctgaattgctgcaaagtcttttgggttccggaatagctgcctca
ctggatgatattgctgataaagagtcatctgagcgacttcggaatagattaattctagat
gaaagatacagcatggctgtctacacttgcaagaagtgtaagattgatgtttttcctgtg
tggaatgcatggggtcatgctctgattaggatggagcgctatgcacaagctcgtgtgaaa
tttaagcaagcacttcaattgtacaagggtgatgctgcaactgttataatggagataatt
ggcaccattgaaggaggtccaccggtagatgtttcatctgttcggtccatgtatgagcat
ttggctcgaagtgcaccagccattttagatgattctctctctgctgattcctatctcaat
gtcttatacatgccatccacttttcctcggtcagagagatccaggagatctcaagaagcc
ttaaatgacagttcttccaacaatacatacttcgaagatggacccaagagcaacttggac
agtgttagataccttgaatgcatcaattattttcaagaatatgctcgtcaacatctgctt
gatttcatgtttcgacatgggcattacaaggatgcttgcttgttatttttccctcccaat
tctgttcctccacctcctcaaccatcttcaggcgttgttacttcatcttcttcccctcaa
cggcaagatcctttggcaacagattatgggacccttgatctattgtgtgatttgtgcact
gcttatggagccatgcctgttttggaggaagtactgtcagaaagaacttctaatataaca
tcacaggatccatcagtgaacaaacatacaactgcagcactttctcgcatctgtaattat
tgcgaaactcacaagcatttcaattatttatacaagtttcaggtgacaaagaaggatcat
gtggcagctgggctttgttgcatacaattgtttatgaattcttcttctcaggaagaagct
ataagacacttggagaatgccaagatgcattttgaggaaggcttgtcagcgcgacataaa
gcaggagagtctactaagcttattaccaagggcatccgaggaaaaagtgcctctgagaaa
ctaactgaagaaggacttgtcaaattttctgctagagttgctattcagatagatgttgtc
aaatgctttaatgatgcagaaggaccacagtggaaacattcactttttggtaatccaaat
gatcctgaaactttcaggaggaggtgtgaaattgcagagactcttgctgagaggaatttc
gacttggctttccaggtgatccatgggttcaaccttccagctgttgacatatatgctggt
gttgctgcatcacttgctgagagaaagaggggaagccaactcacggagttctttaggaac
attaaaggcaccattggtgatgatgattgggatcaggttttgggagcagccatcaatgtg
tatgcaaacaaacacaaagagcgacctgaccgcctgattgacatgttgactagtagccac
aggaaagtacttgcttgtgttgtctgcgggcgtctcaaaagtgcattccaaattgcatcc
agaagtggaagtgtggctgatgttcagtatgttgcacatcaggcattacatgctaatgca
cttccagttcttgatatgtgcaaacaatggctcgctcagtacatgtag
DBGET
integrated database retrieval system
