Nicotiana attenuata (coyote tobacco): 109237573
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Entry
109237573 CDS
T05870
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109237573
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109237573
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
zf_topless
NosD
Motif
Other DBs
NCBI-GeneID:
109237573
NCBI-ProteinID:
XP_019259438
UniProt:
A0A314LGY1
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MLRFSVNLLKLVILLLLLICFLGSAICNENSSVFNVLDYGAKGDGTTDDTKAFEATWIEG
CKVKGSTIVIPSDYDFLVGPISFSGPHCEENIVFLLDGRIIAPTNPKVWGSKGLLQWLEF
KKLNGISVKGKGTIDGQGSVWWQNTHLEDPDDDPNITTLFALTSSTAKGKMPRTRPTALR
FYGCSNVVVTGITIQNSPKAHVKFDSCVSVQVSGITVSSPEDSPNTDGIHLQNSQNVVIH
SSDLACGDDCISIQSGTSAVFIQDVKCGPGHGFSIGGLGKDNTKACVSNITVRDSTLHNT
LTGVRIKTWQGGSGSVQGIMFANIQVLDVETPIMIDQFYCDKSKCKNQTSAVAISGVSYQ
SIKGTYSYEPLHFACSDSVPCTGVSLADIELKPSPEKENFHGPYCWQTYGKLKTKTTPPI
DCIQPDQDTPGYDSC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtttagcgtaaatctcttgaagttagtcattttgctgttattactaatctgt
tttttggggagtgcaatatgcaatgagaattcttctgtctttaatgtattagactatggt
gctaaaggtgacggtactacagatgacaccaaagcatttgaagcgacatggatagaaggt
tgtaaagttaaaggatcaactatagtgattccatcagattatgatttcctagttggaccc
atctctttttcaggaccacactgcgaagaaaacattgttttcctgttggatgggagaatt
atagcaccaacaaaccctaaagtttggggttcaaaagggctattgcaatggcttgaattc
aaaaagctaaatggaatatctgttaaaggaaaaggaactattgatggtcaaggctcagtt
tggtggcaaaacactcatttagaagatcctgatgatgatccaaatattactacgctattt
gctttgacaagtagcacagcaaaaggaaaaatgcccagaaccagaccaacagctctgagg
ttttatgggtgttctaatgtggtagtaacaggaataacaatccaaaacagcccaaaagca
catgtaaagtttgatagttgtgtgagtgttcaagtttcaggtatcacagtttcatcccca
gaagatagccccaatacagatggaattcaccttcagaactcccaaaatgttgttatccat
agcagtgatcttgcttgtggagatgattgcatctctatacaaagtggaacttcagctgtg
ttcattcaggatgtgaagtgtggacctggacatggatttagcataggagggctgggaaaa
gacaacaccaaagcctgtgtctccaacataacagttcgtgattccacactacataatact
ttgactggtgtacgaatcaaaacatggcagggaggctcaggttcagttcaaggaatcatg
tttgcaaatatccaagttttagatgtggaaacaccaataatgatagatcaattctattgt
gataaaagcaaatgcaagaatcagacatcagcagtggccatctcaggggtttcatatcaa
tcaataaaaggaacttattcatatgaaccacttcattttgcatgcagtgattctgtgcca
tgcactggtgtttcccttgcagacatagagcttaaaccttcaccagaaaaggagaatttt
catggaccttattgttggcaaacttatggaaaattgaaaacaaagacaacccctcctatt
gattgcattcaacccgatcaagacacccctggttatgattcttgttga
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