Nicotiana attenuata (coyote tobacco): 109238222
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Entry
109238222 CDS
T05870
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109238222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109238222
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109238222
mRNA degradation factors
5'-3' decay
Decapping complex
109238222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
109238222
NCBI-ProteinID:
XP_019260193
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MSQNGKLMPNLDQNSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDNSQWSRKDVEG
SLFVVKRGCYRSSQPRFQFIVMNRRNTDNLVEDLLGDFEYEVQVPYLLYRNASQEVNGIW
FYNQRECEEVANLFDRILGAYSKVPTKSKVPLTKSEFEELEAVPTMAVIDGPLEPSSSTA
TNAPHLPEENAFLNFFSNAMTIGNAPSTTVPGQPYHSSSPVLPPPRPPAAVPPSSAPALI
PSPPLSTSSLLRPLLDASESDSSAKWSSNLVKPSSFFGPPTASSPLMPAVSSSLPTAPPL
LPLGNLQRPYGAPLLQPFPPPTPPPSLTPASAPTPNYGPVVSRDKVREALLMLVQDDQFI
DMVYRAVLNAHHS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaacggaaaattaatgccgaatctggaccagaacagcaccaagctcctcaac
ttgaccgttcttcagcgtatcgatcctttcattgaagaaattcttatcactgctgctcat
gttaccttctacgaattcaacatcgataacagccaatggagtcgaaaggatgtggaagga
tctctatttgttgtcaagagagggtgttacaggagttctcaaccgcggtttcagtttatt
gttatgaaccgaagaaatacagataatttggtggaggatctcctgggggattttgagtat
gaggtccaggttccatatttgttgtatcgaaatgcttcccaagaagtaaatgggatatgg
ttttataatcagcgtgaatgtgaagaagttgcaaatctctttgacaggatactcggtgcg
tattccaaggtgcctaccaagtcaaaagtaccactgacaaagagtgaatttgaagagctg
gaagcagttccaaccatggctgtaattgatggtcctctggagccatcgtcgtctactgcc
acaaatgctccgcatctccctgaggaaaatgcctttttgaacttcttcagtaatgctatg
acaattgggaatgctccgagtactacagttccagggcagccataccactcatcttcaccg
gtcctgcctcctcctcgtcctcctgctgctgttcctccctcttctgcacctgccctgatt
ccatctccgcctctttcaacttcttcccttttgaggcccctccttgatgcatctgaatca
gacagcagtgctaaatggtcttcaaatctggtgaagccatcatcattttttggtcctcca
accgcctcttctccgctgatgcctgccgtttcttcatctttgcccactgctcccccactt
cttccgcttgggaatctccaacgtccttatggagctcctttgcttcaaccatttcctccg
ccgactcctcctccatctctcactcctgcttctgctcctaccccaaactatggacctgtt
gttagcagagacaaagtgcgggaagcacttctaatgcttgttcaggatgaccaattcatt
gacatggtataccgggcagtgctaaatgctcatcattcataa
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