Nicotiana attenuata (coyote tobacco): 109238724
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Entry
109238724 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109238724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109238724
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109238724
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
HECT type E3
109238724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HEAT_EZ
TFIIA
Motif
Other DBs
NCBI-GeneID:
109238724
NCBI-ProteinID:
XP_019260742
UniProt:
A0A314LB83
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
METRSRKRAEATSSAPSSSSSAGPTTRAAKRARLSSTAAATSTANSTPAAASASISIRSR
ISTRSQDSSTPMDSTNESSGSGTRTRRGKNPSHGSDKDNNNLDKGKEKEHEVRVRDKNRD
RDREAERSLGLNIDSGGGEDEDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPS
SAMGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVP
VLVGLLNHESNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQ
SLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVM
EAVPLLTNLLQYHDAKVLEHASICLTRIAESFASYPEKLDELCNHGLVTQAASLISTSNS
GGGQASLSTSTYTGLIRLLSTCASGSPLGTKTLLLLGISGILKDILSGSGLVASVSVSPA
LSKPPEQIFEIVNLANELLPPLPQGTISLPTSTNLLIKGSVVKKSSASGSTKQEETNLST
QEVSAREKLLNDQPELLQQFGMDLLPVLIQVYGSSVNSPVRHKCLSVIGKLMYFSSADMI
QSLNNITNISSFLAGVLAWKDPQVLVPALQVAEILMEKLPGIFSKIFVREGVVHAVDALI
VSASHGSAPSQPSSAEKDNDCIPGSSRSRRNRRRGNNSNADASSIEDPKSTVPGSGSPPN
PLEIPKTSSSIRMAVSACAKSFKDKYFPSDSGATEVGVTDDLLRLKNLSMKLNSGVDEQL
SKPKGKSKASAPRLGDISASKEETLAELVASMMGELSKGDGVSTFEFIGSGVVASLLNYF
TCGFFSKERISDANLSRLRQQAIRRYKSFIAVALPATVDSGNMVPMTVLVQKLQNALSSL
ERFPVVLSHSSKSSTGNARLSSGLSALSQPFKLRLCRAQGDKTLRDYSSNVVLIDPLASL
AAIEDFLWPRVQRVESGQKAFASVGNSESGTTPAGVGASCPSTSTPASGSRRTRSRSAVN
INDSAKKDPPQEKNGSSSKGKGKAVLKPAQEDGRGPQTRNAARRRAALDKEAEVKPVNGD
SSSEDDELDMSPVEIDDALVIEDDDISDDDEDDHDDVLRDDSLPVCMPDKVHDVKLGDSS
EENPAAQTANDSQTNAGGGSSSRAASAQGSESIEFRSGSSYGSRGAMSFAAAAMAGLASS
NGRGVRGARDRHGRPLFSTSDPPRLVFSAGGKQLNRHLTIYQAIQRQLVLDEDDEERYGG
TDFVSSDGSRLWGDIYTITYQRADSQAERSTKGDGSSTSTKSNKASSSASASADPSFHRA
SLLDSILQGELPCDMEKTNPTYNILALLRVLDGLNQLAPRLRVQSVIDDFSEGENLSLDE
LSATGVKIPPEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTRSCPFLFPFEVRRQY
FYSTAFGLSRALYRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMY
SSQKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQKVGLGMWRTSSISSSSEHSVEVSVDE
KLIGEDKELVQAPLGLFPRPWPSAVDTADGNQFTKVIEYFRLLGRVMAKALQDGRLLDLP
MSTSFYKLVLGQELDLYDILSFDAELGKTLQELQALVSRKQYIESMGGLGQDKISDLHFR
GTPVEDLCLDFTLPGYPEYVLKAGDQNVDLSNLEEYVSLVVDATVRTGIARQMEAFRSGF
NQVFDISALQTFSPTELDYLLCGRRELWKAETLVDHIKFDHGYTAKSPAIVYLLEIMGEF
TPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSASNTASNGNMPSESADDDLPS
VMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggccacctcatcagcgccttcttcatcttct
tctgctggtcccaccacccgtgccgctaagcgtgctcgtctctcctccactgccgccgct
acttccaccgccaattcaactcccgctgccgcgtctgcatcgatctcaattcgttctcgc
atctcaactcgttcccaggactcatctacacccatggactccacaaacgaatcttccggg
tcgggtacccgaacccgccgtggtaagaaccccagtcatggttccgataaagataataat
aatttggataaaggtaaggagaaagagcatgaagttagggttagggataagaatagggat
agggatagggaggctgagaggagtctaggattgaacatagattccggtggtggtgaggac
gaagataatgatagcgaaggcggtgttggtattttgcaccaaaatttgacttcagcaagt
agtgcacttcaaggacttcttaggaaactaggtgctggattggatgatttactccccagc
tctgcaatggggtctgcgtcttcgtcccatcagagtggtcggctcaagaagatattgtcc
ggtttaagggcggatggtgaggaagggaaacaagtagaagctctgactcagctgtgtgag
atgctttctattggaacggaagattcactgagcacattttccgtggactcgttcgtacct
gtgcttgttgggctgttgaatcacgagagcaatcctgacattatgcttcttgcggcccgg
gctcttacccacttggttgatgttctaccttcttcttgtgccgctgttgtccattatgga
gccgtatcatgctttgtagctcggctgcttactattgaatacatggacttggctgagcag
tctttgcaagctctaaagaagatatctcaggaacacccaactgcttgcttgagggctggt
gcgctgatggctgtgctttcttatctcgacttcttttccactggtgttcagagagtagca
ctatcaactgctgctaatatgtgcaagaagcttccttcagatgctgctgactttgtcatg
gaagctgttccgcttttgacaaatctccttcaatatcatgatgcaaaggtattagagcat
gcttccatctgcttgacccgtattgccgaatcatttgcatcataccccgagaagctagat
gaactttgcaatcacggacttgttacccaagccgcatcacttatctcaaccagtaactct
ggaggtggtcaagcttcactcagcacgtcaacctacacaggtttaatccggcttctttcg
acatgtgccagtggctctccactaggaactaaaactttactgctgcttggtatcagtgga
attctcaaggatattctatcaggttctggtcttgtggcctctgtgtctgtttcacctgcc
ttgagcaaacctccggagcagatttttgagatcgtgaacctggcaaatgagcttcttcct
ccgctgcctcaagggaccatctctcttccaaccagcactaatttgttgattaaaggatct
gttgtgaagaaatcttctgctagtggttctaccaaacaggaggagacgaatctatctact
caagaggtttcagctcgagaaaagttattgaatgatcaacctgaacttctgcaacaattt
ggaatggatctgcttcctgtgctgatccaggtatatggatccagtgtcaatagtccagtt
cgccacaagtgtctctcggttattggaaaacttatgtacttcagcagtgcagatatgatt
cagtctctaaataacatcactaacatatcaagttttttggctggagtattggcctggaag
gatccccaagtgctggtgcctgctcttcaagtagcagaaattttaatggaaaaacttcct
ggaattttttccaagatttttgtgcgagaaggtgttgttcatgctgtagatgcactaata
gtgtctgcgtcccatggttccgctccttcccagccatcatctgctgagaaggacaatgat
tgtatacctgggtcatctcgctctaggcgtaatcgacgtcgtgggaataattcaaatgca
gatgcaagttccattgaggatcctaagagtacagttccggggagtggatcaccgccaaac
cctttggaaattccaaagaccagttctagcattcgcatggcagtcagtgcatgtgctaaa
tctttcaaagataaatacttcccttcagattcaggggctactgaagttggcgttactgat
gatcttctacgattgaagaatctcagtatgaagttgaactctggtgttgatgaacaatta
tctaaacctaaaggaaaatcaaaagcttctgctcctcggcttggagatatttctgccagt
aaggaagagaccttggccgaactcgtagcttccatgatgggggagctcagcaaaggagat
ggtgtatcaactttcgaattcattggaagtggagttgttgcatctttgctgaactatttt
acatgtggatttttttccaaggaaagaatctcagatgctaatttgtctaggcttcgacaa
caagcaatcagaagatataagtcttttatcgcagttgcccttcctgctactgttgatagt
ggaaatatggttcctatgactgttttggttcaaaagcttcaaaatgccttatcttcgctg
gagcggttccctgtcgtactgagtcattcttccaaatcatctaccggaaatgcgcgactt
tcttcaggtttaagtgctttgtcgcaaccatttaagcttcgcctttgcagagctcaaggg
gacaagaccctccgtgactactcctcgaatgttgtgttgattgatcctttggcaagtttg
gcggctattgaagactttctttggcctcgagttcagcgagtagagtctggacaaaaggcc
tttgcatcagtaggcaactctgagtctgggaccacccctgcaggagttggtgcttcatgc
ccatctacttctaccccggcttctggatctcggcgtacacgatctaggtcagcggttaat
ataaatgacagtgcaaagaaagacccaccacaggaaaaaaatggaagttcttccaagggc
aaaggaaaggctgttctgaagccggctcaagaagatggcagagggccccagacaagaaat
gctgctcgaagacgagcagccttggataaagaagcagaggtgaaacccgtgaatggggat
tctagttctgaggatgatgagttggatatgtcacctgttgaaattgatgatgctttggtc
atcgaggatgacgatatatctgatgatgatgaagatgaccatgatgatgtgttgagagat
gattctcttcctgtttgcatgcccgacaaagttcatgatgttaaattgggtgattcttca
gaggagaatcctgccgcacagacggcaaatgatagccagacaaatgctggtggtggttct
agcagcagagctgcttctgctcagggatctgaatccattgagttcaggagtgggagttct
tatggttcaaggggtgcaatgtcatttgccgctgctgccatggctggacttgcatcttct
aatggtagaggtgtgagaggggctagagatcgccatggacgccctctctttagcactagt
gatccacccagacttgtattttctgcaggtggaaagcagcttaataggcacttgactatc
taccaggctatccagcggcagcttgtccttgatgaggatgacgaagagagatatggtggc
actgactttgtatctagtgacggaagcagactttggggtgatatttacactatcacatac
caaagggctgacagtcaagcagagaggtctaccaaaggtgatgggagctcaacttccacc
aagtctaacaaagctagttcatcagcaagtgccagtgctgatccctcatttcatcgagca
tcattgttagatagtatattacagggagaacttccttgtgatatggaaaaaaccaatcct
acttacaacattttggccctgttacgtgtactggatggattaaaccagctggccccacgg
ttacgtgtccagtcagttattgatgatttctctgaaggggaaaatttgagtttagatgag
ctcagtgctactggtgtcaaaattcctccggaggaatttgtcaacagtaagctcactcca
aagttggcccgacagattcaggatgctctagccctttgtagtgggtctcttccatcatgg
tgttaccagttgacaaggtcctgtccatttctttttccatttgaggttcgacgccagtac
ttctactcaacagcctttggattatctagggctttatatcggcttcagcaacaacaaggt
gcggatggtaatggatctaccaatgagagagaagttagggtcgggagattacagcgccag
aaagtccgtgtctctagaaatcgtattcttgattctgctgcgaaagtaatggagatgtac
tccagccaaaaagctgttcttgaggttgaatattttggtgaagttggcactggtttgggt
ccaactctggagttctatacccttttaagtcgtgatctgcaaaaagttggactgggaatg
tggaggacaagttctatatcctcatcaagtgaacattcagtggaagtaagcgtggatgaa
aaattgatcggggaagataaagaacttgtccaagcacctcttggattattcccacgcccc
tggccatcggctgttgataccgctgatggaaaccaattcaccaaggtaatagaatatttc
agattgcttgggcgtgtgatggccaaagcacttcaagatgggcgacttttggacctccct
atgtcaacatcattctataaacttgtccttggccaagagcttgatctgtatgatattctc
tcttttgatgctgagttgggaaagactttgcaagagctgcaagctcttgttagtcggaaa
cagtatatagaatcaatgggaggcctgggccaagacaaaattagtgatttgcattttcgt
gggactccagttgaggatctttgtttagatttcacactcccaggctatcctgaatatgtt
ctgaaagcaggcgatcagaatgtggatcttagtaacttggaggaatacgtttctttggtg
gttgatgccactgtgaggactggaattgcgcggcagatggaagcatttagatctggcttc
aatcaggtattcgacatttcagctctgcaaacattctctcctactgagttggactacctg
ctttgtggccgtagagagttatggaaggccgagacgcttgtagatcatatcaaatttgat
catggatatacagccaagagtcccgctattgtttatttactagagatcatgggggagttc
actcctgagcagcaacgagcgttctgtcagtttgtcactggtgctccccggcttcctcca
ggtggtctggctgtgctcaatcctaagctgacaatcgtgaggaagcattcatctagtgct
agtaatacagcatcaaatggtaatatgccatcagaatctgcagacgatgacctacctagt
gtgatgacatgtgctaactacctgaaactgcctccctattctactaaggaaatcatgtac
aaaaagttactctatgctatcaatgaaggccaaggatcttttgatttatcataa
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integrated database retrieval system
