Nicotiana attenuata (coyote tobacco): 109238745
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Entry
109238745 CDS
T05870
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109238745
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109238745
Factors involved in mRNA localization
Other mRNA localization factors
109238745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
109238745
NCBI-ProteinID:
XP_019260761
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MAVPIEEAIAALSTFSLEDDQAEVQGPGFWVSAEGGATISPIEYSDVAAYRLSLSEDTKA
INQLNTLIQEGKEMGSVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLIQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELNFALLFPERHTLLRVLPVLVVLASSSEKDSESLYKRVKINRLISIFKNDPVI
PAFPDLHLSPAAILKELSTYFPKFSAQTRLLTLPAPHELQPREAQEYQRQYLIVNHIGAI
RAEHDDFTVRFASAMSQLVLLKSIDGVDVEWVKEVKGNIYDMVVEGFQLLSRWTARVWEQ
CAWKFSRPCKDPVPIESQEMHASFSDYEKVVRYNYSAEERKALVELVSYIKSIGSMMQKV
DTSVTDALWETIHAEVQDFVQNTVATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPE
TEMQSYQHSGEESRGTFFYPRPVAPTSAQVHCLQFLIYEVVSGGNMRKPGGIFGNSGSEI
PINDLKQLETFFYKLGFFLHVLDYTATLGTLTDLGFLWFREFYLESSRVIQFPIECSLPW
MLVDHVIESPIIGLLESALMPFDIYNDAAQQALVILKQRFLYDEIEAEVDNCFDIFVLKL
CETIFTYYKSWAASELLDPSFLFAIDIGEKFAVQPMRFISLLKTTRVKLLGRTINLRSLI
ADRMNKMFRDNLEFLFDRFESQDLCAIVELEMLLDILQLTHELLSKDLIIDSFNLMLKEM
QENVSLVSYSSRLASQIWTEMQNDFLPNFILCNTTQRFVRSSRVPPVPVQKPSVPYAKPN
FYCGTPDLNSAYQSFARLYCGFFGVPHMFSLVKLLGSRSLPWLMRALLDHISNKITTVEP
MITGLQEALPKSIGLLPFDGGISGCMRLVKEHLSCWHSKSELKAEVLCGIKEIGSILYWM
GLLDIVLREVDTRHFMQTAPWLGLIPGADGQILHSQDGGDSPMVTLFKSATTATVSNHNC
TNPTSFHTISRQAEAADLLYKANINTGSVLEYALAFTSAALDKYCSKWNAAPKTGFIDIT
TSKDFYRIFSGLQIEYLEESVQLQSNTYEMLGDSVAWGGCTIIYLLGQQLHFELFDFSHQ
VLNVAEVESVAISPTQKNPNFLQGIEGLLEAMKKARRLNNHVFSMLKARCPLEDKQACAI
KQSGAPLHRVKFENTVSAFETLPQKGA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggctgttccgattgaagaagctatagctgcactatccacattttctttagaggatgat
caagcagaggtacaaggtccagggttttgggtttcagctgaaggaggtgcaactattagt
ccaattgagtacagtgacgtggctgcatataggctgtcattatcggaagacactaaagct
attaaccagctgaacacacttatacaagaggggaaggaaatgggttccgtgctctacaca
tatagaagttgcgttaaagcgcttcctcagcttccagattctatgaagcaaagccaggct
gacctgtatcttgaaacttatcaagttttggatttggaaatgagccgtctgcgtgaaatc
cagagatggcaagcatcagctgcatctaagctggcagctgacatgcaacgtttttccaga
ccggagcgtcgcattaatggtcccacagtaactcatctatggtccatgctgaagttactt
gatgttctgatccagcttgatcatcttaaaaatgcaaaagctagtatacctaatgacttt
tcttggtacaaaagaacattcacacaagtcagtgtacagtggcaagatacagattcaatg
agggaggagttggatgatttgcagatcttcttgagcacgaggtgggctattttgttaaac
ttgcatgttgagatgttccgggtgaacaatgttgaagacattcttcaagttctcattgtc
ttcatagtcgagtcattggagttgaattttgcacttctgtttccggagaggcacacactt
cttcgtgttttgcctgtccttgttgtcttagcatcatcatcagagaaagatagcgaatca
ttgtacaaaagggtgaaaatcaacagactaattagcatatttaagaatgatcctgtgata
cctgctttcccagatcttcatctgtctcctgctgcaattttaaaagagttatcaacatac
ttccctaaattttctgcacaaactcggcttctcactcttccagcacctcatgagctgcaa
ccgcgtgaggcacaagaatatcagcggcaatatttgattgtcaaccatattggggcgatc
cgtgctgagcatgatgacttcactgttcgttttgcttcagccatgagtcagcttgtcttg
ctaaaatcaatagatggtgtggatgttgagtgggttaaggaagtcaaaggaaatatttat
gacatggttgttgaaggttttcaacttttaagcagatggactgcacgagtttgggagcaa
tgtgcttggaaattttctcgcccatgcaaggatcccgttccaatagagtcacaagagatg
catgcatctttttctgactatgaaaaggtagtacggtacaattatagtgctgaagaaagg
aaggctctggttgaacttgtgagctacatcaagagtattggatcgatgatgcagaaggtt
gacacatcagtgaccgacgccttgtgggagacaatccatgcagaggtgcaagattttgtt
caaaatacagtggcgacaatgttgcggacaacatttcgaaagaagaaagacctttctaga
attctttctgatatgaggacactttcagcagattggatggctaatactagtaagccagag
actgaaatgcagtcatatcagcatagtggtgaagaaagcagagggaccttcttttatcca
aggccagtggcaccaacatctgctcaggtccattgcttgcagttcctcatatatgaggtg
gtttctggtggcaacatgcggaagcctggtggtatttttggaaatagtggttctgaaata
cctatcaatgacttgaaacaactggagacattcttctacaagcttggttttttcttgcat
gtattagactacacagctactctaggaactttgacagatcttggtttcttatggtttaga
gaattctatttggagtcttctcgtgttatacagttccccattgaatgctcccttccatgg
atgttggtggatcatgtgatcgaatctccaatcattggccttctggagagtgccttgatg
ccatttgacatctataatgatgctgctcagcaagcattagtgatcctcaagcaacgcttt
ctatatgatgaaatcgaagctgaggtggacaattgttttgatatatttgtcttgaagttg
tgtgagactatttttacatactacaaaagttgggcagccagtgagctacttgatccatca
ttcctctttgccatagacattggcgaaaagtttgcggtccagccaatgagattcatatca
cttttaaagacgactagagtgaagcttctaggaaggaccatcaacttgagaagtttgatt
gctgataggatgaacaaaatgttcagagataatcttgaattcctgtttgatcgctttgaa
tcacaggatttatgtgccattgtggaactggaaatgttgctggacattttgcaacttact
catgaattgctctcaaaagaccttataatagattctttcaatcttatgttgaaggagatg
caggagaatgtatcccttgtttcttattctagtcgacttgcttctcagatttggacagaa
atgcaaaatgacttcttgccaaatttcatcctttgcaatacaactcagcgctttgtccga
tcatcacgagtaccccctgttcctgtccaaaagccttcggttccttatgcgaagccaaac
ttctactgtggtactcctgatttgaattctgcttaccagagctttgctcgattgtactgt
ggtttttttggcgttcctcacatgttttctctagtcaagctcctgggatctaggtcactg
ccttggcttatgcgagcccttttggatcatatatcgaacaagataactactgttgaacca
atgattactggactgcaagaagctttgccaaaatctatagggttacttccatttgatggt
ggtatatcaggctgtatgaggcttgtcaaggagcatcttagctgctggcattcaaaatct
gaactcaaagctgaagtcctttgtggaatcaaggagattggtagcatattgtactggatg
ggacttcttgatattgtattgagagaagtggatacccgccattttatgcaaactgcccct
tggttgggcttgattcctggtgctgacgggcaaatattgcactctcaagatgggggagat
agccctatggtcactctgtttaaatcagcaactactgctaccgtgtccaaccataactgt
acaaatccaacatcatttcatactatatcaagacaagcagaagctgctgatttgttgtat
aaggccaatattaacactggaagtgtgctggaatatgcccttgcttttacaagtgccgca
ttagataaatactgcagtaaatggaatgcagccccaaagacgggatttattgatattacc
acttccaaggacttctaccggattttcagcggactccaaattgaatacttggaggaatct
gttcagctacaatccaacacttatgaaatgttgggcgactcagttgcttggggtggatgt
acaataatctacctgcttggccaacaattgcattttgaactgtttgatttttcccatcaa
gtcctcaatgttgccgaggtggagtctgtagcaatatcgccaacccagaagaatcctaat
ttcctccagggaattgaaggtttgctagaagctatgaagaaagctaggaggctaaataat
cacgtattttcaatgttgaaagctcgctgcccattggaagataaacaggcttgtgcgatc
aaacaaagtggtgcaccattgcatcgggtaaaatttgagaatactgtgtctgcctttgaa
acattgccacagaaaggtgcctga
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