Nicotiana attenuata (coyote tobacco): 109238873
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Entry
109238873 CDS
T05870
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109238873
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109238873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC3
TPR_19
TPR_8
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109238873
NCBI-ProteinID:
XP_019260900
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MESLCFHDGNITDLINKRSLHVRHDSGHGLQMHSSLVERMALERELEGHQGCVNAIAWNS
KGSLLISGSDDTRMNIWSYSSCKLLHSIETGHTANIFCTKFVPETSDELVVSGAGDAEVR
LFHLSHLKGRGAEDGALTPSALFQCHTRRVKKIAVEVGNPHVVWSASEDGTVRQHDLREG
ASCPPAGSSRQECRNILLDLRCGAKKSLTDPPKQLFALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLSSSQKKLPPPPCVSYFCPMHLSDRGRSSLHLTHVAFSPNGEEVLLSYSG
EHVYLMDVNPAHGGSMPYTSGDASNLMNFAPLLNGIELQSSVSGIFVNSSSSKRIPATKQ
LEKCKKLIQMAMKSLKEDSNFYYGIEACNEVLDGCRDDVGPLLTFECLCTRAAILLKRKW
KNDAHMAIRDCHRARKLNSSSFRPLLLIADALSQLGKHKEALEFAIGAQSLAPSDSEVAL
KVESIKDHITAGMLIHIHALMRTNNIPGFTAEADKANKANGGESRSDPRAGRVLSLSDIL
YRSDANSDASQDGPRSERDDSDDDEELELAFETSISGDEGRDVDLDVLHGSLNLRIHRRG
DSTGETGRANGASGSPTSSQKEKAAYKPEVVIDMKQRYIGHCNVGTDIKQASFLGERGEY
IACGSDDGRWFIWEKQTGRLIKMLHGDEAVVNCVQCHPYDCVVATSGIDSTIKIWTPSAS
VPSLVAGGAAGPETSNVLDAMESNQRRLCRTREAVLPFEFLERFRMHEFTEGSLHPFECT
QS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaatcactctgtttccacgacggcaacatcactgacttgatcaacaaacgatccctc
cacgttcgccatgactccggtcatggattgcagatgcactcctctttggtggaaagaatg
gccttagaaagagaattggaggggcatcagggttgtgtgaatgcgatagcttggaactct
aaaggctcgcttttgatatctggatcagatgatacaagaatgaatatctggagttattca
agctgcaaacttttgcattccattgagaccggtcacactgccaacatattctgcacgaag
tttgttccagaaacttcagatgagctagtcgtttctggagcaggagatgctgaagttcgt
ctttttcatttgtctcatctaaagggaagaggtgctgaagacggtgctttgactccgtcc
gctctatttcagtgtcatactaggagggttaagaaaatagctgtcgaagttgggaatcct
catgtagtatggagtgctagtgaagatgggacagtgaggcagcatgacttacgggagggt
gcgtcttgtcccccagctggttcttctcgtcaagaatgccgtaatatacttcttgactta
cgctgtggagctaagaaatcattaactgatcctccgaaacagttgtttgctctgaagtcg
tgtgatattagctccacaaggcctcatttgctccttgttggtggaagtgatgcttttgct
cggttgtatgataggagaatgctgcctccattatcctcgagtcaaaaaaagctgccacct
ccaccttgtgtcagctacttctgcccaatgcatctttctgatcgtggacgttccagcttg
catctgactcatgtcgcatttagtcccaacggagaggaggttttgcttagctacagtgga
gaacatgtatacttgatggatgtgaatcctgcacatggaggttctatgccgtatacttca
ggagatgcgtcaaacctgatgaattttgctcccttgctcaatggaatcgaattgcaatca
tcagttagtggaatctttgtaaacagttcttcatcgaaaagaattccagctaccaagcag
ctagaaaaatgcaaaaaattgattcagatggcaatgaagtctttgaaagaagattccaac
ttttattatgggatagaagcttgtaatgaagtcttggacggttgcagggatgacgttggt
ccccttctaaccttcgaatgtttatgcactcgtgcagcaatattgctcaagaggaagtgg
aaaaatgatgcacatatggctataagagattgtcatagagctagaaagctcaattcatct
tcctttaggcctcttcttttgatcgctgatgctctttcacagttgggtaaacataaagaa
gcattggagttcgctattggcgctcaatccttggctccatctgattctgaagttgcccta
aaggtggagagtataaaagatcatatcactgcaggaatgctaattcatattcatgcttta
atgcgtaccaacaatattcctggatttacagctgaagcagacaaagcaaataaggcaaat
ggaggagaatctaggtcagatcctcgggcaggaagagtattatctctaagtgacatactt
tatcgttcggacgcaaacagtgatgcatcgcaagatggtcccaggtctgaaagagatgat
tctgatgatgacgaggagttagaattggcttttgaaacatcaatatccggtgatgaagga
cgggatgttgatctcgatgtcctccatggaagtttgaacttaagaattcataggagaggc
gattccactggggagactggacgagcaaatggtgctagtggttcgccaacctcgagtcaa
aaagagaaagcagcttacaagcctgaagtagtgatagatatgaagcaaagatatattggt
cattgcaacgtaggcactgatataaaacaggcgagctttcttggagaacgaggtgaatat
attgcttgtggaagtgatgatggaagatggtttatttgggagaaacaaactggtagactg
ataaaaatgcttcatggagatgaagctgttgtaaattgtgtacagtgccacccatatgat
tgtgttgtggctaccagtggaattgatagcaccattaagatttggactccgagtgcgtct
gtcccttccctcgtggctggtggagctgcaggaccagagacttccaatgtgttagatgca
atggaaagcaatcaacgcagattgtgccgcacgcgtgaagctgtcttgccttttgaattt
ttggagagatttaggatgcacgagtttacagaaggcagcttacatccattcgaatgcacg
cagagctga
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